Arthrobacter phage Auxilium
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Detailed Information for Phage Auxilium
Discovery Information
Isolation HostArthrobacter globiformis B-2979
Found ByPatrick Rimple
Year Found2017
Location FoundBuffalo, NY USA
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates42.93382 N, 78.64562 W Map
Discovery NotesIt came from a pile of dirt used in landscaping
Naming NotesLatin word
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedSep 7, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage707
Genome length (bp)49447
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCCGGTGA
GC Content62.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterAY
Subcluster--
Cluster Life CycleTemperate
Lysogeny NotesWas able to make a lysogen. It shows homoimmunity and phage release in the supernatant. Supernatant was also PCR verified with phage specific primer. See lab notebook THS.
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque Notesclear plaques, 3 mm or less in size
Number of Genes93
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Auxilium_1
(terminase small subunit)

Auxilium_2
(terminase large subunit, ATPase domain)

Auxilium_3
(terminase large subunit, nuclease domain)

Auxilium_4
(portal protein)

Auxilium_5
(capsid maturation protease)

Auxilium_6
(scaffolding protein)

Auxilium_7
(capsid decoration protein)

Auxilium_8
(major capsid protein)

Auxilium_9

Auxilium_10
(head-to-tail adaptor)

Auxilium_11
(head-to-tail stopper)

Auxilium_12

Auxilium_13
(tail terminator)

Auxilium_14

Auxilium_15
(major tail protein)

Auxilium_16
(tail assembly chaperone)

Auxilium_17
(tail assembly chaperone)

Auxilium_18

Auxilium_19
(tape measure protein)

Auxilium_20
(minor tail protein)

Auxilium_21
(minor tail protein)

Auxilium_22
(minor tail protein)

Auxilium_23
(minor tail protein)

Auxilium_24

Auxilium_25

Auxilium_26

Auxilium_27
(lysin A)

Auxilium_28

Auxilium_29

Auxilium_30

Auxilium_31

Auxilium_32

Auxilium_33
(helix-turn-helix DNA-binding domain protein)

Auxilium_34
(integrase)

Auxilium_35

Auxilium_36

Auxilium_37
(helix-turn-helix DNA-binding domain protein)

Auxilium_38
(integrase)

Auxilium_39

Auxilium_40

Auxilium_41

Auxilium_42

Auxilium_43

Auxilium_44

Auxilium_45

Auxilium_46

Auxilium_47

Auxilium_48
(helix-turn-helix DNA-binding domain protein)

Auxilium_49
(helix-turn-helix DNA-binding domain protein)

Auxilium_50
(excise)

Auxilium_51

Auxilium_52
(helix-turn-helix DNA-binding domain protein)

Auxilium_53
(oxidoreductase)

Auxilium_54

Auxilium_55

Auxilium_56

Auxilium_57

Auxilium_58

Auxilium_59

Auxilium_60

Auxilium_61
(DNA binding protein)

Auxilium_62

Auxilium_63

Auxilium_64
(exonuclease)

Auxilium_65

Auxilium_66
(RNA ligase)

Auxilium_67

Auxilium_68
(ssDNA-binding protein)

Auxilium_69

Auxilium_70

Auxilium_71
(glutaredoxin)

Auxilium_72

Auxilium_73
(DNA helicase/methylase)

Auxilium_74
(helix-turn-helix DNA-binding domain protein)

Auxilium_75
(DNA polymerase III beta subunit)

Auxilium_76

Auxilium_77
(DNA methylase)

Auxilium_78
(DNA binding protein)

Auxilium_79
(HNH endonuclease)

Auxilium_80

Auxilium_81

Auxilium_82
(MazG-like nucleotide pyrophosphohydrolase)

Auxilium_83

Auxilium_84
(RusA-like resolvase)

Auxilium_85

Auxilium_86

Auxilium_87

Auxilium_88

Auxilium_89
(helix-turn-helix DNA-binding domain protein)

Auxilium_90

Auxilium_91

Auxilium_92

Auxilium_93
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH834598
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 6
Pitt Freezer Box Grid# C4
Available Files
Plaque PictureDownload
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload