Microbacterium phage Cen1621
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Detailed Information for Phage Cen1621
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224
Found ByKetsy M. Torres-Arroyo
Year Found2021
Location FoundCoamo, PR USA
Finding InstitutionUniversity of Puerto Rico at Cayey
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates18.073889 N, 66.37 W Map
Discovery NotesFrom moist soil, rich in organic nutrients.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 2, 2021
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1261
Genome length (bp)49371
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCGAGGCGGCAT
GC Content70.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEH
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Puerto Rico at Cayey
Annotation StatusIn GenBank
Plaque NotesOriginally named Petite, because it came from very small plaques. However, all purifications resulted in more than one morphology: big and small (petite) plaques. Was purified 7X.
Has been Phamerated?Yes
Gene List

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Cen1621_1
(terminase, small subunit)

Cen1621_2
(terminase, large subunit)

Cen1621_3
(portal protein)

Cen1621_4

Cen1621_5
(scaffolding protein)

Cen1621_6
(major capsid protein)

Cen1621_7
(head-to-tail adaptor)

Cen1621_8
(head-to-tail stopper)

Cen1621_9

Cen1621_10
(tail terminator)

Cen1621_11
(major tail protein)

Cen1621_12
(tail assembly chaperone)

Cen1621_13
(tail assembly chaperone)

Cen1621_14
(tape measure protein)

Cen1621_15
(minor tail protein)

Cen1621_16
(minor tail protein)

Cen1621_17
(minor tail protein)

Cen1621_18
(minor tail protein)

Cen1621_19
(endolysin)

Cen1621_20
(tail needle protein)

Cen1621_21
(holin)

Cen1621_22

Cen1621_23
(deoxynucleoside monophosphate kinase)

Cen1621_24

Cen1621_25
(Cas4 family exonuclease)

Cen1621_26

Cen1621_27

Cen1621_28
(LAGLIDADG endonuclease)

Cen1621_29

Cen1621_30

Cen1621_31

Cen1621_32

Cen1621_33

Cen1621_34

Cen1621_35

Cen1621_36
(recombination directionality factor)

Cen1621_37

Cen1621_38
(arsenate reductase)

Cen1621_39

Cen1621_40
(Holliday junction resolvase)

Cen1621_41
(DNA primase)

Cen1621_42

Cen1621_43

Cen1621_44
(DNA polymerase I)

Cen1621_45

Cen1621_46
(DNA binding protein)

Cen1621_47
(helix-turn-helix DNA binding domain)

Cen1621_48
(SprT-like protease)

Cen1621_49

Cen1621_50

Cen1621_51

Cen1621_52

Cen1621_53

Cen1621_54

Cen1621_55

Cen1621_56
(serine integrase)

Cen1621_57

Cen1621_58

Cen1621_59

Cen1621_60

Cen1621_61

Cen1621_62

Cen1621_63

Cen1621_64

Cen1621_65
(rtcB-like RNA ligase)

Cen1621_66

Cen1621_67

Cen1621_68

Cen1621_69
(Lsr2-like DNA bridging protein)

Cen1621_70

Cen1621_71

Cen1621_72

Cen1621_73

Cen1621_74

Cen1621_75

Cen1621_77
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionON970568
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload