Microbacterium phage IAmGroot
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Detailed Information for Phage IAmGroot
Discovery Information
Isolation HostMicrobacterium aerolatum NRRL B-24228
Former namesBbgroot
Found ByKatelyn Matney
Year Found2018
Location FoundDamascus, MD USA
Finding InstitutionJames Madison University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature37°C
GPS Coordinates39.26 N, 77.21 W Map
Discovery NotesDirt collected 1-5 inches underground September 6, 2018.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedApr 17, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage400
Genome length (bp)45625
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCGGGGAGGCAT
GC Content70.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEH
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionJames Madison University
Annotation StatusIn GenBank
Plaque Notesclear, small plaques
Has been Phamerated?Yes
Gene List

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IAmGroot_1
(terminase small subunit)

IAmGroot_2
(terminase large subunt)

IAmGroot_3
(portal protein)

IAmGroot_4
(ADP-ribosyltransferase domain and MuF-like fusion protein)

IAmGroot_5

IAmGroot_6
(scaffolding protein)

IAmGroot_7
(major capsid protein)

IAmGroot_8
(head-to-tail adaptor)

IAmGroot_9

IAmGroot_10

IAmGroot_11
(tail terminator)

IAmGroot_12
(major tail protein)

IAmGroot_13
(tail assembly chaperone)

IAmGroot_14
(tail assembly chaperone)

IAmGroot_15
(tape measure protein)

IAmGroot_16
(minor tail protein)

IAmGroot_17
(minor tail protein)

IAmGroot_18

IAmGroot_19
(minor tail protein)

IAmGroot_20
(minor tail protein)

IAmGroot_21
(lysin A)

IAmGroot_22

IAmGroot_23

IAmGroot_24

IAmGroot_25

IAmGroot_26

IAmGroot_27
(deoxynucleoside monophosphate kinase)

IAmGroot_28

IAmGroot_29
(exonuclease)

IAmGroot_30
(deoxycytidylate deminase)

IAmGroot_31

IAmGroot_32
(LAGLIDADG endonuclease)

IAmGroot_33

IAmGroot_34

IAmGroot_35

IAmGroot_36

IAmGroot_37

IAmGroot_38

IAmGroot_39

IAmGroot_40

IAmGroot_41

IAmGroot_42
(thioredoxin)

IAmGroot_43

IAmGroot_44
(holliday junction resolvase)

IAmGroot_45
(DNA primase)

IAmGroot_46

IAmGroot_47

IAmGroot_48
(DNA polymerase I)

IAmGroot_49

IAmGroot_50
(RNA polymerase sigma factor)

IAmGroot_51

IAmGroot_52

IAmGroot_53
(SprT-like protease)

IAmGroot_54

IAmGroot_55

IAmGroot_56

IAmGroot_57
(serine integrase)

IAmGroot_58

IAmGroot_59

IAmGroot_60

IAmGroot_61

IAmGroot_62

IAmGroot_63

IAmGroot_64

IAmGroot_65

IAmGroot_66

IAmGroot_67

IAmGroot_68
(ssDNA binding protein)

IAmGroot_69

IAmGroot_70

IAmGroot_71

IAmGroot_72

IAmGroot_73

IAmGroot_74

IAmGroot_75
(HNH endonuclease)

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK880124
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives