Arthrobacter phage Chubster
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Detailed Information for Phage Chubster
Discovery Information
Isolation HostArthrobacter sp. ATCC 21022
Found BySakina Hasan
Year Found2015
Location FoundLansdowne, PA USA
Finding InstitutionCabrini University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates39.940708 N, 75.261294 W Map
Discovery NotesFound in my backyard in my uncle's garden, soil was near plants.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 15, 2015
Sequencing FacilityNC State Genomic Sciences Laboratory
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage1361
Genome length (bp)70258
Character of genome endsCircularly Permuted
GC Content61.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterAR
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
Plaque Notesplaques are small, round and clear

phage grows with various calcium chloride concentrations.Grows optimal with 5mM, 25mM and 50mM calcium chloride at room temperature and 30 degrees Celsius. Phage does not form plaques without calcium chloride or at 37 degrees Celsius. Plaques grow best with higher calcium chloride concentrations. Plaques also form with 5mM and 25mM Magnesium sulfate concentrations but, not as well as calcium chloride.
MorphotypeMyoviridae
Number of Genes112
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

Chubster_1

Chubster_2

Chubster_3
(terminase)

Chubster_4
(portal protein)

Chubster_5
(MuF-like minor capsid protein)

Chubster_6

Chubster_7

Chubster_8

Chubster_9

Chubster_10
(scaffolding protein)

Chubster_11
(capsid decoration protein)

Chubster_12
(major capsid protein)

Chubster_13

Chubster_14

Chubster_15
(minor tail protein)

Chubster_16

Chubster_17

Chubster_18
(tail sheath protein)

Chubster_19
(tail tube protein)

Chubster_20

Chubster_21

Chubster_22
(tape measure protein)

Chubster_23
(minor tail protein)

Chubster_24
(minor tail protein)

Chubster_25

Chubster_26
(minor tail protein)

Chubster_27
(minor tail protein)

Chubster_28

Chubster_29

Chubster_30

Chubster_31
(endolysin)

Chubster_32
(holin)

Chubster_33

Chubster_34

Chubster_35

Chubster_36

Chubster_37
(helix-turn-helix DNA binding domain protein)

Chubster_38
(baseplate wedge protein)

Chubster_39
(baseplate J protein)

Chubster_40

Chubster_41

Chubster_42

Chubster_43
(MRE11 double-strand break endo/exonuclease)

Chubster_44

Chubster_45

Chubster_46
(RecE-like exonuclease)

Chubster_47
(RecT-like ssDNA binding protein)

Chubster_48

Chubster_49

Chubster_50

Chubster_51

Chubster_52

Chubster_53

Chubster_54

Chubster_55

Chubster_56

Chubster_57

Chubster_58

Chubster_59

Chubster_60

Chubster_61

Chubster_62

Chubster_63

Chubster_64

Chubster_65

Chubster_66

Chubster_67

Chubster_68

Chubster_69

Chubster_70

Chubster_71

Chubster_72

Chubster_73
(endolysin)

Chubster_74

Chubster_75

Chubster_76

Chubster_77

Chubster_78

Chubster_79

Chubster_80

Chubster_81
(DNA methylase)

Chubster_82

Chubster_83
(DNA methylase)

Chubster_84

Chubster_85

Chubster_86

Chubster_87

Chubster_88

Chubster_89
(Cas4 family exonuclease)

Chubster_90
(DNA helicase)

Chubster_91

Chubster_92
(nucleoside deoxyribosyltransferase)

Chubster_93

Chubster_94

Chubster_95
(RusA-like resolvase)

Chubster_96

Chubster_97

Chubster_98

Chubster_99

Chubster_100
(HNH endonuclease)

Chubster_101
(ssDNA binding protein)

Chubster_102

Chubster_103

Chubster_104
(DNA polymerase III sliding clamp)

Chubster_105

Chubster_106

Chubster_107

Chubster_108

Chubster_109

Chubster_110

Chubster_111
(protease)

Chubster_112
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKX670786
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Designator Cabrini College
SEA Lysate Titer 3.1x10^7
Date of SEA Lysate Titering Jun 30, 2015
Pitt Freezer Box# 149
Pitt Freezer Box Grid# C1
Available Files
Plaque PictureDownload
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload