Arthrobacter phage JayCookie
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Detailed Information for Phage JayCookie
Discovery Information
Isolation HostArthrobacter sp. ATCC 21022
Found ByJadyn Cookman
Year Found2016
Location FoundRiver Falls, WI USA
Finding InstitutionUniversity of Wisconsin-River Falls
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature28°C
GPS Coordinates44.853246 N, 92.624756 W Map
Discovery NotesBy a trash can outside of Hagestad Hall on UWRF campus. Found Monday 09/12/16 at 8:58am. The soil was moist and loose. It was found 13mm deep into the ground. The weather was sunny and 66 degrees Fahrenheit out.
Naming NotesIt is named JayCookie because that is two of my nicknames put together.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMar 6, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage43
Genome length (bp)70362
Character of genome endsCircularly Permuted
GC Content61.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterAR
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
Plaque NotesThe plaques varied from being small to very small in size, but they were all clear and did not contain a halo.
MorphotypeMyoviridae
Has been Phamerated?Yes
Gene List

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JayCookie_1

JayCookie_2

JayCookie_3
(terminase large subunit)

JayCookie_4
(portal protein)

JayCookie_5
(capsid assembly protein)

JayCookie_6

JayCookie_7

JayCookie_8

JayCookie_9

JayCookie_10
(capsid maturation protease)

JayCookie_11
(capsid decoration protein)

JayCookie_12
(major capsid protein)

JayCookie_13

JayCookie_14

JayCookie_15
(minor tail protein)

JayCookie_16

JayCookie_17

JayCookie_18
(tail sheath protein)

JayCookie_19

JayCookie_20

JayCookie_21

JayCookie_22
(tape measure protein)

JayCookie_23
(LysM domain protein)

JayCookie_24
(minor tail protein)

JayCookie_25
(minor tail protein)

JayCookie_26
(minor tail protein)

JayCookie_27
(minor tail protein)

JayCookie_28

JayCookie_29

JayCookie_30

JayCookie_31
(lysin A)

JayCookie_32
(holin)

JayCookie_33

JayCookie_34

JayCookie_35

JayCookie_36

JayCookie_37
(helix-turn-helix DNA binding domain protein)

JayCookie_38
(baseplate wedge protein)

JayCookie_39
(baseplate J-like protein)

JayCookie_40

JayCookie_41

JayCookie_42

JayCookie_43
(DNA repair protein)

JayCookie_44
(helix-turn-helix DNA binding domain protein)

JayCookie_45

JayCookie_46
(RecE-like endonuclease)

JayCookie_47
(recombinase)

JayCookie_48

JayCookie_49

JayCookie_50

JayCookie_51

JayCookie_52

JayCookie_53

JayCookie_54

JayCookie_55

JayCookie_56

JayCookie_57

JayCookie_58

JayCookie_59

JayCookie_60

JayCookie_61

JayCookie_62

JayCookie_63

JayCookie_64

JayCookie_65

JayCookie_66

JayCookie_67

JayCookie_68

JayCookie_69

JayCookie_70

JayCookie_71

JayCookie_72

JayCookie_73
(endolysin domain protein)

JayCookie_74

JayCookie_75

JayCookie_76

JayCookie_77

JayCookie_78

JayCookie_79

JayCookie_80
(cytosine DNA methylase)

JayCookie_81
(DNA methyltransferase domain protein)

JayCookie_82
(DNA methylase)

JayCookie_83

JayCookie_84

JayCookie_85

JayCookie_86

JayCookie_87

JayCookie_88

JayCookie_89
(endonuclease)

JayCookie_90
(helicase)

JayCookie_91

JayCookie_92

JayCookie_93

JayCookie_94

JayCookie_95
(endodeoxyribonuclease)

JayCookie_96

JayCookie_97

JayCookie_98

JayCookie_99

JayCookie_100

JayCookie_101

JayCookie_102
(ssDNA binding protein)

JayCookie_103

JayCookie_104

JayCookie_105

JayCookie_106
(DNA polymerase III subunit beta)

JayCookie_107

JayCookie_108

JayCookie_109
(helix-turn-helix DNA binding protein)

JayCookie_110

JayCookie_111

JayCookie_112

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMF668274
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 1.5 x 10^9
Date of SEA Lysate Titering Oct 10, 2016
Pitt Freezer Box# 37
Pitt Freezer Box Grid# F4
Available Files
EM PictureDownload
GenBank File for PhameratorDownload