Detailed Information for Phage Circum |
Discovery Information |
Isolation Host | Arthrobacter sp. ATCC 21022 |
Found By | Quynh Vo |
Year Found | 2013 |
Location Found | Denton, TX USA |
Finding Institution | University of North Texas |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 33.212622 N, 97.14895 W Map |
Discovery Notes | The sample was taken at night on 8-27-13 and soil conditions were moist at the time of collection. The soil type was top soil. |
Naming Notes | Named for its unsually and annoyingly small size. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Dec 6, 2013 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 5127 |
Genome length (bp) | 58353 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CGCCGGCCT |
GC Content | 45.2% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | AM |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Plaque Notes | Plaques are small, clear. Average diameter is around 0.3 mm. |
Morphotype | Siphoviridae |
Number of Genes | 99 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | KU160642 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
147 |
Pitt Freezer Box Grid# |
F11 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
Virtual Digest Picture | Download |
EM Picture | Download |
Final DNAMaster File | Download |