| Detailed Information for Phage Circum | |
| Discovery Information | |
| Isolation Host | Arthrobacter sp. ATCC 21022 |
| Found By | Quynh Vo |
| Year Found | 2013 |
| Location Found | Denton, TX USA |
| Finding Institution | University of North Texas |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 33.212622 N, 97.14895 W Map |
| Discovery Notes | The sample was taken at night on 8-27-13 and soil conditions were moist at the time of collection. The soil type was top soil. |
| Naming Notes | Named for its unsually and annoyingly small size. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Dec 6, 2013 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 5127 |
| Genome length (bp) | 58353 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 9 bases |
| Overhang Sequence | CGCCGGCCT |
| GC Content | 45.2% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | AM |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members | |
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Plaque Notes | Plaques are small, clear. Average diameter is around 0.3 mm. |
| Morphotype | Siphoviridae |
| Number of Genes | 99 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewCircum_1 Circum_2 Circum_3 Circum_4 Circum_5 Circum_6 Circum_7 Circum_8 Circum_9 Circum_10 Circum_11 Circum_12 Circum_13 Circum_14 Circum_15 Circum_16 Circum_17 Circum_18 Circum_19 Circum_20 Circum_21 Circum_22 Circum_23 Circum_24 Circum_25 Circum_26 Circum_27 Circum_28 Circum_29 Circum_30 Circum_31 Circum_32 Circum_33 Circum_34 Circum_35 Circum_36 Circum_37 Circum_38 Circum_39 Circum_40 Circum_41 Circum_42 Circum_43 Circum_44 Circum_45 Circum_46 Circum_47 Circum_48 Circum_49 Circum_50 Circum_51 Circum_52 Circum_53 Circum_54 Circum_55 Circum_56 Circum_57 Circum_58 Circum_59 Circum_60 Circum_61 Circum_62 Circum_63 Circum_64 Circum_65 Circum_66 Circum_67 Circum_68 Circum_69 Circum_70 Circum_71 Circum_72 Circum_73 Circum_74 Circum_75 Circum_76 Circum_77 Circum_78 Circum_79 Circum_80 Circum_81 Circum_82 Circum_83 Circum_84 Circum_85 Circum_86 Circum_87 Circum_88 Circum_89 Circum_90 Circum_91 Circum_92 Circum_93 Circum_94 Circum_95 Circum_96 Circum_97 Circum_98 Circum_99 |
| Submitted Annotation in DNA Master Format | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | KU160642 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 147 |
| Pitt Freezer Box Grid# | F11 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| Virtual Digest Picture | Download |
| EM Picture | Download |
| Final DNAMaster File | Download |
