| Detailed Information for Phage DelaGarza |
| Discovery Information |
| Isolation Host | Microbacterium foliorum NRRL B-24224 |
| Found By | Daniela de la Garza |
| Year Found | 2019 |
| Location Found | Mission, TX USA |
| Finding Institution | South Texas College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 30°C |
| GPS Coordinates | 26.2166 N, 98.2821 W Map |
| Discovery Notes | This Phage was discovered in a compost pile from a backyard in Mission,Texas |
| Naming Notes | This Phage was named after my Father. I named it after him because it was found in a compost pile that he was responsible for creating. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 21, 2020 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 1604 |
| Genome length (bp) | 39631 |
| Character of genome ends | Circularly Permuted |
| End Determination Notes | No obvious read start buildups were observed, there is even coverage throughout, and the best matches for the terminase are to other circularly permuted genomes. |
| GC Content | 70.0% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | GF |
| Subcluster | -- |
| Cluster Life Cycle | Unknown |
| Other Cluster Members |
|
| Annotating Institution | South Texas College |
| Annotation Status | In GenBank |
| Number of Genes | 70 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MT889371 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
110 |
| Pitt Freezer Box Grid# |
F7 |
| Available Files |
| EM Picture | Download |
| GenBank File for Phamerator | Download |