Microbacterium phage DelaGarza
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage DelaGarza
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224
Found ByDaniela de la Garza
Year Found2019
Location FoundMission, TX USA
Finding InstitutionSouth Texas College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates26.2166 N, 98.2821 W Map
Discovery NotesThis Phage was discovered in a compost pile from a backyard in Mission,Texas
Naming NotesThis Phage was named after my Father. I named it after him because it was found in a compost pile that he was responsible for creating.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 21, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1604
Genome length (bp)39631
Character of genome endsCircularly Permuted
End Determination NotesNo obvious read start buildups were observed, there is even coverage throughout, and the best matches for the terminase are to other circularly permuted genomes.
GC Content70.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterGF
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members

Click to View

Annotating InstitutionSouth Texas College
Annotation StatusIn GenBank
Has been Phamerated?Yes
Gene List

Click to View

DelaGarza_1
(helix-turn-helix DNA binding domain protein)

DelaGarza_2

DelaGarza_3

DelaGarza_4

DelaGarza_5
(minor tail protein)

DelaGarza_6

DelaGarza_7

DelaGarza_8
(terminase)

DelaGarza_9
(portal protein)

DelaGarza_10
(minor capsid protein)

DelaGarza_11
(scaffolding protein)

DelaGarza_12
(major capsid protein)

DelaGarza_13

DelaGarza_14
(head-to-tail adaptor)

DelaGarza_15
(head-to-tail stopper)

DelaGarza_16
(minor capsid protein)

DelaGarza_17
(tail terminator)

DelaGarza_18
(major tail protein)

DelaGarza_19
(tail assembly chaperone)

DelaGarza_20
(tape measure protein)

DelaGarza_21
(minor tail protein)

DelaGarza_22
(minor tail protein)

DelaGarza_23

DelaGarza_24
(minor tail protein)

DelaGarza_25
(minor tail protein)

DelaGarza_26

DelaGarza_27

DelaGarza_28
(endolysin)

DelaGarza_29

DelaGarza_30

DelaGarza_31

DelaGarza_32

DelaGarza_33
(HNH endonuclease)

DelaGarza_34

DelaGarza_35

DelaGarza_36

DelaGarza_37

DelaGarza_38

DelaGarza_39

DelaGarza_40

DelaGarza_41
(MerR-like helix-turn-helix DNA binding domain protein)

DelaGarza_42
(RusA-like resolvase)

DelaGarza_43
(ssDNA-binding protein)

DelaGarza_44
(helicase loader)

DelaGarza_45
(helix-turn-helix DNA binding domain protein)

DelaGarza_46

DelaGarza_47

DelaGarza_48

DelaGarza_49

DelaGarza_50
(exonuclease)

DelaGarza_51
(RecA-like DNA recombinase)

DelaGarza_52

DelaGarza_53

DelaGarza_54

DelaGarza_55

DelaGarza_56

DelaGarza_57

DelaGarza_58
(HNH endonuclease)

DelaGarza_59

DelaGarza_60

DelaGarza_61
(ParB-like nuclease domain protein)

DelaGarza_62

DelaGarza_63

DelaGarza_64

DelaGarza_65

DelaGarza_66

DelaGarza_67

DelaGarza_68

DelaGarza_69

DelaGarza_70

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMT889371
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 110
Pitt Freezer Box Grid# F7
Available Files
EM PictureDownload
GenBank File for PhameratorDownload