| Detailed Information for Phage Dogfish | |
| Discovery Information | |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Lauren Nguyen & Abby Byford |
| Year Found | 2018 |
| Location Found | Tyler, TX, LA USA |
| Finding Institution | University of Louisiana at Monroe |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Unknown |
| Isolation Temperature | Not entered |
| GPS Coordinates | 32.2529 N, 95.3152 W Map |
| Discovery Notes | In a ball park's dirt parking lot. |
| Naming Notes | Sequenced as a mixed phage sample with Gordoina phage Catfish. Once purified, we named this second isolate 'Dogfish'. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Feb 26, 2018 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 670 |
| Genome length (bp) | 41907 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 9 bases |
| Overhang Sequence | CGCGGGGGA |
| GC Content | 67.5% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | DT |
| Subcluster | -- |
| Cluster Life Cycle | Unknown |
| Other Cluster Members | |
| Annotating Institution | University of Louisiana at Monroe |
| Annotation Status | In GenBank |
| Number of Genes | 55 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewDogfish_1 Dogfish_2 Dogfish_3 Dogfish_4 Dogfish_5 Dogfish_6 Dogfish_7 Dogfish_8 Dogfish_9 Dogfish_10 Dogfish_11 Dogfish_12 Dogfish_13 Dogfish_14 Dogfish_15 Dogfish_16 Dogfish_17 Dogfish_18 Dogfish_19 Dogfish_20 Dogfish_21 Dogfish_22 Dogfish_23 Dogfish_24 Dogfish_25 Dogfish_26 Dogfish_27 Dogfish_28 Dogfish_29 Dogfish_30 Dogfish_31 Dogfish_32 Dogfish_33 Dogfish_34 Dogfish_35 Dogfish_36 Dogfish_37 Dogfish_38 Dogfish_39 Dogfish_40 Dogfish_41 Dogfish_42 Dogfish_43 Dogfish_44 Dogfish_45 Dogfish_46 Dogfish_47 Dogfish_48 Dogfish_49 Dogfish_50 Dogfish_51 Dogfish_52 Dogfish_53 Dogfish_54 Dogfish_55 |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MK524505 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 79 |
| Pitt Freezer Box Grid# | B8 |
| Available Files | |
| GenBank File for Phamerator | Download |