Detailed Information for Phage Faja |
Discovery Information |
Isolation Host | Arthrobacter globiformis B-2979 |
Found By | Megan Ulbrich |
Year Found | 2017 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 40.452728 N, 79.9437 W Map |
Discovery Notes | Soil was moist and clumpy. |
Naming Notes | This phage is named after my father who I call Faja. It is an awesome phage just like he is! |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Sep 1, 2017 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 534 |
Genome length (bp) | 52490 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CGCCGGTGA |
GC Content | 63.1% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | AY |
Subcluster | -- |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Plaque Notes | Faja plaques are clear and vary in size from <1mm to 2mm. |
Morphotype | Siphoviridae |
Number of Genes | 95 |
Number of tRNAs | 1 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MH834612 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
6 |
Pitt Freezer Box Grid# |
G1 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |