| Detailed Information for Phage Globfish | |
| Discovery Information | |
| Isolation Host | Arthrobacter globiformis B-2979 |
| Found By | Joncarlo Estrada |
| Year Found | 2023 |
| Location Found | South San Francisco, CA United States |
| Finding Institution | Skyline College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 37.661167 N, 122.411722 W Map |
| Discovery Notes | Isolated and characterized by Joncarlo Estrada, Rey Alferez, and Mariah Fontela. Instructor: Rocky Ng The soil sample was taken on the South San Francisco historical landmark, sign hill (37°39'40.2"N 122°24'42.2"W). |
| Naming Notes | Globfish is a reference to blobfish. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Mar 31, 2023 |
| Sequencing Facility | NC State Genomic Sciences Laboratory |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 515 |
| Genome length (bp) | 51397 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 9 bases |
| Overhang Sequence | CGCCGGTGA |
| GC Content | 62.8% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | AY |
| Subcluster | -- |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
Click to ViewAbbyDaisy AdaS Aikyam Anekin Auxilium BenchScraper Bhageatrice BillyTP BlueShadow CookieBear EvePickles Faja Globfish Gorpy Hestia Hillester Isolde Lawnathon MaterMagnus MidnightRain Persistence Phrank15 RadFad Raphaella Raqqa Richie Sakai Sashimi Seahorse Shukran SpicyFrank ThayneTheZag Tiff81 Vopal Windest YoungHarleezy |
| Annotating Institution | Collin College |
| Annotation Status | Awaiting_QC |
| Plaque Notes | Phage titer: 2.00 x 10^10 PFU/mL Plaque diameter: 2 mm Plaques appear to be cloudy and turbid. |
| Morphotype | Siphoviridae |
| Number of Genes | 93 |
| Number of tRNAs | 1 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewGlobfish_1 Globfish_2 Globfish_3 Globfish_4 Globfish_5 Globfish_6 Globfish_7 Globfish_8 Globfish_9 Globfish_10 Globfish_11 Globfish_12 Globfish_13 Globfish_14 Globfish_15 Globfish_16 Globfish_17 Globfish_18 Globfish_19 Globfish_20 Globfish_21 Globfish_22 Globfish_23 Globfish_24 Globfish_25 Globfish_26 Globfish_27 Globfish_28 Globfish_29 Globfish_30 Globfish_31 Globfish_32 Globfish_33 Globfish_34 Globfish_35 Globfish_36 Globfish_37 Globfish_38 Globfish_39 Globfish_40 Globfish_41 Globfish_42 Globfish_43 Globfish_44 Globfish_45 Globfish_46 Globfish_47 Globfish_48 Globfish_49 Globfish_50 Globfish_51 Globfish_52 Globfish_53 Globfish_54 Globfish_55 Globfish_56 Globfish_57 Globfish_58 Globfish_59 Globfish_60 Globfish_61 Globfish_62 Globfish_63 Globfish_64 Globfish_65 Globfish_66 Globfish_67 Globfish_68 Globfish_69 Globfish_70 Globfish_71 Globfish_72 Globfish_73 Globfish_74 Globfish_75 Globfish_76 Globfish_77 Globfish_78 Globfish_79 Globfish_80 Globfish_81 Globfish_82 Globfish_83 Globfish_84 Globfish_85 Globfish_86 Globfish_87 Globfish_88 Globfish_89 Globfish_90 Globfish_91 — tRNA Globfish_92 Globfish_93 Globfish_94 |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Lysate Titer | 2.00 x 10^10 PFU/mL |
| Pitt Freezer Box# | 191 |
| Pitt Freezer Box Grid# | B12 |
| Available Files | |
| EM Picture | Download |