| Detailed Information for Phage Globfish |
| Discovery Information |
| Isolation Host | Arthrobacter globiformis B-2979 |
| Found By | Joncarlo Estrada |
| Year Found | 2023 |
| Location Found | South San Francisco, CA United States |
| Finding Institution | Skyline College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 37.661167 N, 122.411722 W Map |
| Discovery Notes | Isolated and characterized by Joncarlo Estrada, Rey Alferez, and Mariah Fontela.
Instructor: Rocky Ng
The soil sample was taken on the South San Francisco historical landmark, sign hill (37°39'40.2"N 122°24'42.2"W). |
| Naming Notes | Globfish is a reference to blobfish. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Mar 31, 2023 |
| Sequencing Facility | NC State Genomic Sciences Laboratory |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 515 |
| Genome length (bp) | 51397 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 9 bases |
| Overhang Sequence | CGCCGGTGA |
| GC Content | 62.8% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | AY |
| Subcluster | -- |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | Collin College |
| Annotation Status | QC Complete |
| Plaque Notes | Phage titer: 2.00 x 10^10 PFU/mL
Plaque diameter: 2 mm
Plaques appear to be cloudy and turbid. |
| Morphotype | Siphoviridae |
| Number of Genes | 94 |
| Number of tRNAs | 2 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| SEA Lysate Titer |
2.00 x 10^10 PFU/mL |
| Pitt Freezer Box# |
191 |
| Pitt Freezer Box Grid# |
B12 |
| Available Files |
| EM Picture | Download |
| GenBank File for Phamerator | Download |