| Detailed Information for Phage Globfish | |
| Discovery Information | |
| Isolation Host | Arthrobacter globiformis B-2979 |
| Found By | Joncarlo Estrada |
| Year Found | 2023 |
| Location Found | South San Francisco, CA United States |
| Finding Institution | Skyline College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 37.661167 N, 122.411722 W Map |
| Discovery Notes | Isolated and characterized by Joncarlo Estrada, Rey Alferez, and Mariah Fontela. Instructor: Rocky Ng The soil sample was taken on the South San Francisco historical landmark, sign hill (37°39'40.2"N 122°24'42.2"W). |
| Naming Notes | Globfish is a reference to blobfish. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Mar 31, 2023 |
| Sequencing Facility | NC State Genomic Sciences Laboratory |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 515 |
| Genome length (bp) | 51397 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 9 bases |
| Overhang Sequence | CGCCGGTGA |
| GC Content | 62.8% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | AY |
| Subcluster | -- |
| Cluster Life Cycle | Temperate |
| Other Cluster Members | |
| Annotating Institution | Collin College |
| Annotation Status | Being Annotated (Expected completion by 12/15/2024) |
| Plaque Notes | Phage titer: 2.00 x 10^10 PFU/mL Plaque diameter: 2 mm Plaques appear to be cloudy and turbid. |
| Morphotype | Siphoviridae |
| Number of Genes | 93 |
| Number of tRNAs | 1 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewGlobfish_1 Globfish_2 Globfish_3 Globfish_4 Globfish_5 Globfish_6 Globfish_7 Globfish_8 Globfish_9 Globfish_10 Globfish_11 Globfish_12 Globfish_13 Globfish_14 Globfish_15 Globfish_16 Globfish_17 Globfish_18 Globfish_19 Globfish_20 Globfish_21 Globfish_22 Globfish_23 Globfish_24 Globfish_25 Globfish_26 Globfish_27 Globfish_28 Globfish_29 Globfish_30 Globfish_31 Globfish_32 Globfish_33 Globfish_34 Globfish_35 Globfish_36 Globfish_37 Globfish_38 Globfish_39 Globfish_40 Globfish_41 Globfish_42 Globfish_43 Globfish_44 Globfish_45 Globfish_46 Globfish_47 Globfish_48 Globfish_49 Globfish_50 Globfish_51 Globfish_52 Globfish_53 Globfish_54 Globfish_55 Globfish_56 Globfish_57 Globfish_58 Globfish_59 Globfish_60 Globfish_61 Globfish_62 Globfish_63 Globfish_64 Globfish_65 Globfish_66 Globfish_67 Globfish_68 Globfish_69 Globfish_70 Globfish_71 Globfish_72 Globfish_73 Globfish_74 Globfish_75 Globfish_76 Globfish_77 Globfish_78 Globfish_79 Globfish_80 Globfish_81 Globfish_82 Globfish_83 Globfish_84 Globfish_85 Globfish_86 Globfish_87 Globfish_88 Globfish_89 Globfish_90 Globfish_91 — tRNA Globfish_92 Globfish_93 Globfish_94 |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Lysate Titer | 2.00 x 10^10 PFU/mL |
| Pitt Freezer Box# | 191 |
| Pitt Freezer Box Grid# | B12 |
| Available Files | |
| EM Picture | Download |