Detailed Information for Phage GoldDust | |
Discovery Information | |
Isolation Host | Arthrobacter globiformis B-2979 |
Found By | Riya Miglani |
Year Found | 2024 |
Location Found | West Lafayette, IN United States |
Finding Institution | Purdue University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 28°C |
GPS Coordinates | 40.42468 N, 86.91057 W Map |
Discovery Notes | Phage Purified and Amplified by: Delilah Flora and Riona O'Grady The sample was taken alongside The Union Club Hotel on North Grant St from soil near mixed grasses and trees. The sample was taken in a 15 mL test tube and was about ¾ full. The temperature was ~21.1 degrees C and was collected around 8am. The soil was damp and compacted, though there was no rain this weekend. The sample was taken about 3 cm from the top of the soil. |
Naming Notes | This name has no meaning. |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 8, 2025 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 2579 |
Genome length (bp) | 48761 |
Character of genome ends | Circularly Permuted |
GC Content | 66.5% |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | FL |
Subcluster | -- |
Cluster Life Cycle | Unknown |
Other Cluster Members | |
Annotating Institution | Purdue University |
Annotation Status | Being Annotated (Expected completion by 5/1/2025) |
Plaque Notes | The plaques are approximately 3mm in diameter. They are round in shape and have generally uniform edges. They also exhibit the bullseye morphology. |
Morphotype | Siphoviridae |
Number of Genes | 75 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
Click to ViewGoldDust_1 GoldDust_2 GoldDust_3 GoldDust_4 GoldDust_5 GoldDust_6 GoldDust_7 GoldDust_8 GoldDust_9 GoldDust_10 GoldDust_11 GoldDust_12 GoldDust_13 GoldDust_14 GoldDust_15 GoldDust_16 GoldDust_17 GoldDust_18 GoldDust_19 GoldDust_20 GoldDust_21 GoldDust_22 GoldDust_23 GoldDust_24 GoldDust_25 GoldDust_26 GoldDust_27 GoldDust_28 GoldDust_29 GoldDust_30 GoldDust_31 GoldDust_32 GoldDust_33 GoldDust_34 GoldDust_35 GoldDust_36 GoldDust_37 GoldDust_38 GoldDust_39 GoldDust_40 GoldDust_41 GoldDust_42 GoldDust_43 GoldDust_44 GoldDust_45 GoldDust_46 GoldDust_47 GoldDust_48 GoldDust_49 GoldDust_50 GoldDust_51 GoldDust_52 GoldDust_53 GoldDust_54 GoldDust_55 GoldDust_56 GoldDust_57 GoldDust_58 GoldDust_59 GoldDust_60 GoldDust_61 GoldDust_62 GoldDust_63 GoldDust_64 GoldDust_65 GoldDust_66 GoldDust_67 GoldDust_68 GoldDust_69 GoldDust_70 GoldDust_71 GoldDust_72 GoldDust_73 GoldDust_74 GoldDust_75 |
Publication Info | |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Not in Pitt Archives |
Available Files | |
Plaque Picture | Download |
EM Picture | Download |