| Detailed Information for Phage GoldDust | |
| Discovery Information | |
| Isolation Host | Arthrobacter globiformis B-2979 |
| Found By | Riya Miglani |
| Year Found | 2024 |
| Location Found | West Lafayette, IN United States |
| Finding Institution | Purdue University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 28°C |
| GPS Coordinates | 40.42468 N, 86.91057 W Map |
| Discovery Notes | Phage Purified and Amplified by: Delilah Flora and Riona O'Grady The sample was taken alongside The Union Club Hotel on North Grant St from soil near mixed grasses and trees. The sample was taken in a 15 mL test tube and was about ¾ full. The temperature was ~21.1 degrees C and was collected around 8am. The soil was damp and compacted, though there was no rain this weekend. The sample was taken about 3 cm from the top of the soil. |
| Naming Notes | This name has no meaning. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 8, 2025 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina NextSeq 1000 |
| Read Type | Single-end reads |
| Read Length | 100 bp |
| Approximate Shotgun Coverage | 2579 |
| Genome length (bp) | 48761 |
| Character of genome ends | Circularly Permuted |
| GC Content | 66.5% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | FL |
| Subcluster | -- |
| Cluster Life Cycle | Unknown |
| Other Cluster Members | |
| Annotating Institution | Purdue University |
| Annotation Status | In GenBank |
| Plaque Notes | The plaques are approximately 3mm in diameter. They are round in shape and have generally uniform edges. They also exhibit the bullseye morphology. |
| Morphotype | Siphoviridae |
| Number of Genes | 76 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewGoldDust_1 GoldDust_2 GoldDust_3 GoldDust_4 GoldDust_5 GoldDust_6 GoldDust_7 GoldDust_8 GoldDust_9 GoldDust_10 GoldDust_11 GoldDust_12 GoldDust_13 GoldDust_14 GoldDust_15 GoldDust_16 GoldDust_17 GoldDust_18 GoldDust_19 GoldDust_20 GoldDust_21 GoldDust_22 GoldDust_23 GoldDust_24 GoldDust_25 GoldDust_26 GoldDust_27 GoldDust_28 GoldDust_29 GoldDust_30 GoldDust_31 GoldDust_32 GoldDust_33 GoldDust_34 GoldDust_35 GoldDust_36 GoldDust_37 GoldDust_38 GoldDust_39 GoldDust_40 GoldDust_41 GoldDust_42 GoldDust_43 GoldDust_44 GoldDust_45 GoldDust_46 GoldDust_47 GoldDust_48 GoldDust_49 GoldDust_50 GoldDust_51 GoldDust_52 GoldDust_53 GoldDust_54 GoldDust_55 GoldDust_56 GoldDust_57 GoldDust_58 GoldDust_59 GoldDust_60 GoldDust_61 GoldDust_62 GoldDust_63 GoldDust_64 GoldDust_65 GoldDust_66 GoldDust_67 GoldDust_68 GoldDust_69 GoldDust_70 GoldDust_71 GoldDust_72 GoldDust_73 GoldDust_74 GoldDust_75 GoldDust_76 |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | PX234429 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 213 |
| Pitt Freezer Box Grid# | B10 |
| Available Files | |
| Plaque Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
