| Detailed Information for Phage Hendrix |
| Discovery Information |
| Isolation Host | Microbacterium foliorum NRRL B-24224 |
| Former names | Mellow |
| Found By | Ann-Catherine Stanton |
| Year Found | 2016 |
| Location Found | Pittsburgh, PA USA |
| Finding Institution | University of Pittsburgh |
| Program | Phage Hunters Integrating Research and Education |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 40.4444 N, 79.9525 W Map |
| Discovery Notes | Found in soil from the Cathedral of Learning lawn, by stone steps. The soil was moist, soft, and dark brown. |
| Naming Notes | Named in memory of Roger W. Hendrix, July 7, 1943-Aug. 15, 2017. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Sep 15, 2016 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 881 |
| Genome length (bp) | 97757 |
| Character of genome ends | Circularly Permuted |
| GC Content | 66.1% |
| Sequencing Notes | Appears to be circularly permuted, but not verified. Appears to have predominantly single-strand coverage with multiple areas of low coverage. Start called upstream of the terminase. |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | GC |
| Subcluster | -- |
| Cluster Life Cycle | Unknown |
| Other Cluster Members |
|
| Annotating Institution | University of Pittsburgh |
| Annotation Status | In GenBank |
| Plaque Notes | Plaques are clear with different morphologies, ranging from about 0.5 mm in diameter to about 1.25 mm in diameter. |
| Morphotype | Siphoviridae |
| Number of Genes | 155 |
| Number of tRNAs | 4 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MH183162 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
5 |
| Pitt Freezer Box Grid# |
B9 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
