Arthrobacter phage Ichiang
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Detailed Information for Phage Ichiang
Discovery Information
Isolation HostArthrobacter globiformis B-2979
Found ByIsabelle Chiang
Year Found2024
Location FoundLos Angeles, CA United States
Finding InstitutionUniversity of Southern California
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates34.02819 N, 118.28486 W Map
Discovery NotesDry soil, was relatively sandy, and contained small bits of dried-up leaves. Adopted from Jenny Jung
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 6, 2025
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Sequencer UsedIllumina NextSeq 1000
Read TypeSingle-end reads
Read Length100 bp
Approximate Shotgun Coverage5284
Genome length (bp)41984
Character of genome ends3' Sticky Overhang
Overhang Length12 bases
Overhang SequenceTCCGCCGCGTGA
GC Content64.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterFF
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Southern California
Annotation StatusIn GenBank
Number of Genes65
Number of tRNAs1
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Ichiang_1

Ichiang_2
(helix-turn-helix DNA binding domain)

Ichiang_3
(terminase, small subunit)

Ichiang_4
(terminase, large subunit)

Ichiang_5
(portal protein)

Ichiang_6
(capsid maturation protease)

Ichiang_7
(scaffolding protein)

Ichiang_8
(major capsid protein)

Ichiang_9

Ichiang_10
(head-to-tail adaptor)

Ichiang_11
(head-to-tail stopper)

Ichiang_12

Ichiang_13
(tail terminator)

Ichiang_14
(major tail protein)

Ichiang_15

Ichiang_16
(tail assembly chaperone)

Ichiang_17
(tail assembly chaperone)

Ichiang_18
(tape measure protein)

Ichiang_19
(minor tail protein)

Ichiang_20
(minor tail protein)

Ichiang_21

Ichiang_22
(minor tail protein)

Ichiang_23
(endolysin)

Ichiang_24

Ichiang_25
(minor tail protein)

Ichiang_26
(minor tail protein)

Ichiang_27

Ichiang_28

Ichiang_29

Ichiang_30
(esterase)

Ichiang_31

Ichiang_32
(esterase)

Ichiang_33

Ichiang_34
(tyrosine integrase)

Ichiang_35 — tRNA
(tRNA-Arg(tct))

Ichiang_36
(tyrosine integrase)

Ichiang_37

Ichiang_38

Ichiang_39

Ichiang_40
(helix-turn-helix DNA binding domain)

Ichiang_41
(helix-turn-helix DNA binding domain, MerR-like)

Ichiang_42

Ichiang_43

Ichiang_44

Ichiang_45

Ichiang_46

Ichiang_47
(ParB N-terminal-like nuclease domain)

Ichiang_48

Ichiang_49

Ichiang_50
(helix-turn-helix DNA binding domain)

Ichiang_51
(DNA polymerase III sliding clamp (Beta))

Ichiang_52

Ichiang_53

Ichiang_54

Ichiang_55

Ichiang_56

Ichiang_57

Ichiang_58

Ichiang_59

Ichiang_60

Ichiang_61
(VRR-Nuc domain protein)

Ichiang_62

Ichiang_63

Ichiang_64

Ichiang_65
(HNH endonuclease)

Ichiang_66

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPX307267
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 191
Pitt Freezer Box Grid# G7
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
GenBank File for PhameratorDownload