| Detailed Information for Phage Ichor | |
| Discovery Information | |
| Isolation Host | Arthrobacter sp. ATCC 21022 |
| Found By | Courtney Smith, Alec Bagwell |
| Year Found | 2015 |
| Location Found | Waco, TX USA |
| Finding Institution | Baylor University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 31.551111 N, 97.106111 W Map |
| Discovery Notes | Found in 2014 by Courtney Smith at a construction site in a gutter. This soil was not processed until 2015. The other phage isolated from this soil is ColeMichael. |
| Naming Notes | Ichor is in reference to the mythological "blood of the gods." |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 28, 2016 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 7356 |
| Genome length (bp) | 59173 |
| Character of genome ends | Direct Terminal Repeat |
| Direct Terminal Repeat Length | 1584 bp |
| GC Content | 52.9% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | AQ |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members | |
| Annotating Institution | University of Pittsburgh |
| Annotation Status | In GenBank |
| Plaque Notes | Plaques forms lytic circles, clearly defined when seen within 48 hours. Most plaques are about 3 mm in diameter, but some are smaller. |
| Morphotype | Siphoviridae |
| Number of Genes | 88 |
| Number of tRNAs | 5 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewIchor_1 Ichor_2 Ichor_3 Ichor_4 Ichor_5 Ichor_6 Ichor_7 Ichor_8 Ichor_9 Ichor_10 Ichor_11 Ichor_12 — tRNA Ichor_13 — tRNA Ichor_14 — tRNA Ichor_15 — tRNA Ichor_16 Ichor_17 Ichor_18 Ichor_19 Ichor_20 Ichor_21 Ichor_22 Ichor_23 Ichor_24 Ichor_25 Ichor_26 Ichor_27 Ichor_28 Ichor_29 Ichor_30 Ichor_31 Ichor_32 Ichor_33 Ichor_34 Ichor_35 Ichor_36 Ichor_37 Ichor_38 Ichor_39 Ichor_40 Ichor_41 Ichor_42 Ichor_43 Ichor_44 Ichor_45 Ichor_46 Ichor_47 Ichor_48 Ichor_49 Ichor_50 Ichor_51 Ichor_52 Ichor_53 Ichor_54 Ichor_55 Ichor_56 Ichor_57 Ichor_58 — tRNA Ichor_59 Ichor_60 Ichor_61 Ichor_62 Ichor_63 Ichor_64 Ichor_65 Ichor_66 Ichor_67 Ichor_68 Ichor_69 Ichor_70 Ichor_71 Ichor_72 Ichor_73 Ichor_74 Ichor_75 Ichor_76 Ichor_77 Ichor_78 Ichor_79 Ichor_80 Ichor_81 Ichor_82 Ichor_83 Ichor_84 Ichor_85 Ichor_86 Ichor_87 Ichor_88 Ichor_89 Ichor_90 Ichor_91 Ichor_92 Ichor_93 |
| Submitted Minimal DNA Master File | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MN234217 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 21 |
| Pitt Freezer Box Grid# | D3 |
| Available Files | |
| Plaque Picture | Download |
| EM Picture | Download |
| Final DNAMaster File | Download |
| GenBank File for Phamerator | Download |