Detailed Information for Phage IdentityCrisis |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Justice B. Widman |
Year Found | 2018 |
Location Found | Port Saint Lucie, FL USA |
Finding Institution | Indian River State College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 37°C |
GPS Coordinates | 27.316112 N, 80.408922 W Map |
Discovery Notes | Found under a plant bed near a local strip mall. Phage obtained during middle of day and had been collected in hot and dry day, with somewhat moist soil. |
Naming Notes | Phage is named after the difficulty of obtaining a single isolated phage. During isolation step, the phage was unwilling to separate from another and made me waste 5 weeks trying to isolate without giving any indication that there was multiple phages present. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Feb 27, 2019 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 332 |
Genome length (bp) | 38341 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CTCAGGGCAT |
GC Content | 65.0% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | Singleton |
Subcluster | -- |
Cluster Life Cycle | Unknown |
Other Cluster Members |
|
Annotating Institution | Indian River State College |
Annotation Status | In GenBank |
Number of Genes | 60 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MN234184 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
77 |
Pitt Freezer Box Grid# |
H11 |
Available Files |
EM Picture | Download |
GenBank File for Phamerator | Download |