Detailed Information for Phage Karkharias |
Discovery Information |
Isolation Host | Arthrobacter globiformis B-2979 |
Former names | Sharkesha |
Found By | Allison Kenney and Vanessa Mleczko |
Year Found | 2023 |
Location Found | Danvers, MA United States |
Finding Institution | Mount Saint Mary College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 30°C |
GPS Coordinates | 42.57045 N, 70.97622 W Map |
Discovery Notes | This phage was discovered in front of a hotel from soil under a tree. |
Naming Notes | My lab partner and I have a special bond formed through our love of sharks. This is so special to us that we had to incorporate it into our name. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 17, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 1270 |
Genome length (bp) | 42611 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CGCCGGAGA |
GC Content | 65.2% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | FA |
Subcluster | -- |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | Mount Saint Mary College |
Annotation Status | In GenBank |
Number of Genes | 66 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | PQ184797 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |
SEA Lysate Titer |
3.24 x1010 PFU/ml |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |