Corynebacterium phage MicyPS
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage MicyPS
Discovery Information
Isolation HostCorynebacterium glutamicum MB001
Found ByMickael Marques and Cindy Goodur
Year Found2024
Location FoundVilliers-sur-Marne, France
Finding InstitutionUniversity Paris-Saclay
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates48.829132 N, 2.537859 E Map
Naming NotesThe phage's name came from the combination of our names and the initials of our university.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 24, 2025
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Sequencer UsedIllumina NextSeq 1000
Read TypeSingle-end reads
Read Length100 bp
Approximate Shotgun Coverage1262
Genome length (bp)78208
Character of genome endsCircularly Permuted
GC Content53.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEQ
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members

Click to View

Annotating InstitutionUniversity Paris-Saclay
Annotation StatusIn GenBank
Plaque NotesPlaques are clear and 1 to 2-mm in diameter
MorphotypeSiphoviridae
Number of Genes115
Number of tRNAs5
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

MicyPS_1
(helix-turn-helix DNA binding domain)

MicyPS_2
(terminase)

MicyPS_3
(portal protein)

MicyPS_4
(minor capsid protein)

MicyPS_5
(scaffolding protein)

MicyPS_6
(major capsid protein)

MicyPS_7

MicyPS_8
(head-to-tail adaptor)

MicyPS_9
(head-to-tail stopper)

MicyPS_10

MicyPS_11
(tail terminator)

MicyPS_12
(major tail protein)

MicyPS_13
(tail assembly chaperone)

MicyPS_14
(tail assembly chaperone)

MicyPS_15
(tape measure protein)

MicyPS_16
(minor tail protein)

MicyPS_17
(minor tail protein)

MicyPS_18

MicyPS_19
(minor tail protein)

MicyPS_20
(minor tail protein)

MicyPS_21
(minor tail protein)

MicyPS_22

MicyPS_23
(minor tail protein)

MicyPS_24
(endolysin)

MicyPS_25
(holin)

MicyPS_26

MicyPS_27

MicyPS_28

MicyPS_29

MicyPS_30

MicyPS_31

MicyPS_32

MicyPS_33

MicyPS_34
(DNAQ-like DNA polymerase III subunit)

MicyPS_35

MicyPS_36

MicyPS_37

MicyPS_38

MicyPS_39

MicyPS_40

MicyPS_41

MicyPS_42

MicyPS_43

MicyPS_44

MicyPS_45

MicyPS_46

MicyPS_47
(PAPS reductase-like domain)

MicyPS_48

MicyPS_49

MicyPS_50

MicyPS_51

MicyPS_52

MicyPS_53

MicyPS_54

MicyPS_55

MicyPS_56

MicyPS_57

MicyPS_58

MicyPS_59
(endonuclease)

MicyPS_60
(helix-turn-helix DNA binding domain)

MicyPS_61

MicyPS_62

MicyPS_63

MicyPS_64

MicyPS_65

MicyPS_66

MicyPS_67
(antirepressor)

MicyPS_68

MicyPS_69

MicyPS_70
(DNA binding protein)

MicyPS_71
(ASCE ATPase)

MicyPS_72
(DNA binding protein)

MicyPS_73
(band-7-like membrane protein)

MicyPS_74

MicyPS_75
(SSB protein)

MicyPS_76

MicyPS_77
(RecT-like DNA pairing protein)

MicyPS_78
(exonuclease)

MicyPS_79 — tRNA
(tRNA-Trp(cca))

MicyPS_80 — tRNA
(tRNA-Ala(cgc))

MicyPS_81 — tRNA
(tRNA-Arg(tct))

MicyPS_82 — tRNA
(tRNA-Lys(ttt))

MicyPS_83 — tRNA
(tRNA-Gln(ttg))

MicyPS_84
(dUTPase)

MicyPS_85

MicyPS_86

MicyPS_87

MicyPS_88

MicyPS_89
(ASCE ATPase)

MicyPS_90
(helix-turn-helix DNA binding protein)

MicyPS_91

MicyPS_92

MicyPS_93

MicyPS_94

MicyPS_95

MicyPS_96

MicyPS_97

MicyPS_98

MicyPS_99
(DNA binding protein)

MicyPS_100

MicyPS_101

MicyPS_102

MicyPS_103

MicyPS_104
(helix-turn-helix DNA binding domain)

MicyPS_105

MicyPS_106

MicyPS_107
(RuvC-like resolvase)

MicyPS_108

MicyPS_109

MicyPS_110

MicyPS_111

MicyPS_112

MicyPS_113
(thymidylate kinase)

MicyPS_114

MicyPS_115
(HNH endonuclease)

MicyPS_116

MicyPS_117

MicyPS_118

MicyPS_119

MicyPS_120

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPV876931
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 212
Pitt Freezer Box Grid# D11
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload