Detailed Information for Phage Nivinsha |
Discovery Information |
Isolation Host | Arthrobacter sp. ATCC 21022 |
Found By | Jaanumathe Govindasamy |
Year Found | 2021 |
Location Found | Edmond, OK United States |
Finding Institution | University of Central Oklahoma |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 28°C |
GPS Coordinates | 35.657222 N, 97.478333 W Map |
Discovery Notes | The soil was slightly damp and was light brown in color. Dug 2 inches deep. Found large roots in the trees. |
Naming Notes | I decided to combine my parents and dog’s name together |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Aug 20, 2021 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 687 |
Genome length (bp) | 58174 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CGCCGGCCT |
GC Content | 49.9% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | AU |
Subcluster | AU1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | University of Central Oklahoma |
Annotation Status | Being Annotated (Expected completion by 12/1/2025) |
Plaque Notes | The morphology of the plaques are seen to be moderately large, round, and clear |
Morphotype | Siphoviridae |
Number of Genes | 93 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |