Detailed Information for Phage Nyceirae |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Found By | Whitney Moore |
Year Found | 2015 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Unknown |
Isolation Temperature | Not entered |
GPS Coordinates | 40.445 N, 79.954 W Map |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 28, 2016 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 2198 |
Genome length (bp) | 41857 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CGCGGGGGA |
GC Content | 67.5% |
Sequencing Notes | added sequence (GCGGGGGGGGGGGGGGC) 29409 - 29426 bp |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | DT |
Subcluster | -- |
Cluster Life Cycle | Unknown |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Number of Genes | 60 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | KX557282 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
2 |
Pitt Freezer Box Grid# |
G9 |
Available Files |
Restriction Digest Picture | Download |
EM Picture | Download |
Final DNAMaster File | Download |