| Detailed Information for Phage Percival | |
| Discovery Information | |
| Isolation Host | Microbacterium foliorum NRRL B-24224 |
| Found By | Johnathon Schiebel |
| Year Found | 2016 |
| Location Found | Cabot, PA USA |
| Finding Institution | University of Pittsburgh |
| Program | Phage Hunters Integrating Research and Education |
| From enriched soil sample? | Unknown |
| Isolation Temperature | Not entered |
| GPS Coordinates | 40.796111 N, 79.759722 W Map |
| Discovery Notes | Was found in soil at the edge of an empty garden taken on July 16th, 2016. Weather was humid and 86 degrees Fahrenheit. Sample was taken from 2 inches below the surface of the soil. Soil was dark brown and had some grass and root matter present. |
| Naming Notes | The second name of Albus Dumbledore, and also a knight in Arthurian legend |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Feb 9, 2017 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 94 |
| Genome length (bp) | 47364 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 11 bases |
| Overhang Sequence | CGGAGGGGCAT |
| GC Content | 69.6% |
| Sequencing Notes | at position 16501 bp 25% of reads contain a C instead of consensus T |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | EH |
| Subcluster | -- |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
Click to View |
| Annotating Institution | University of Pittsburgh |
| Annotation Status | In GenBank |
| Morphotype | Siphoviridae |
| Number of Genes | 74 |
| Number of tRNAs | 1 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewPercival_1 Percival_2 Percival_3 Percival_4 Percival_5 Percival_6 Percival_7 Percival_8 Percival_9 Percival_10 Percival_11 Percival_12 Percival_13 Percival_14 Percival_15 Percival_16 Percival_17 Percival_18 Percival_19 Percival_20 Percival_21 Percival_22 Percival_23 Percival_24 Percival_25 Percival_26 Percival_27 Percival_28 Percival_29 Percival_30 Percival_31 Percival_32 Percival_33 Percival_34 Percival_35 Percival_36 Percival_37 Percival_38 Percival_39 Percival_40 Percival_41 Percival_42 Percival_43 Percival_44 Percival_45 Percival_46 Percival_47 Percival_48 Percival_49 Percival_50 Percival_51 Percival_52 Percival_53 Percival_54 Percival_55 Percival_56 Percival_57 Percival_76 Percival_59 Percival_60 Percival_61 Percival_62 Percival_63 Percival_64 Percival_65 Percival_66 Percival_67 Percival_68 Percival_69 Percival_70 Percival_71 Percival_72 Percival_73 Percival_74 — tRNA Percival_75 |
| Submitted Minimal DNA Master File | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MH271308 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 8 |
| Pitt Freezer Box Grid# | C1 |
| Available Files | |
| EM Picture | Download |
| Final DNAMaster File | Download |
| GenBank File for Phamerator | Download |