Microbacterium phage Percival
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Detailed Information for Phage Percival
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224
Found ByJohnathon Schiebel
Year Found2016
Location FoundCabot, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates40.796111 N, 79.759722 W Map
Discovery NotesWas found in soil at the edge of an empty garden taken on July 16th, 2016. Weather was humid and 86 degrees Fahrenheit. Sample was taken from 2 inches below the surface of the soil. Soil was dark brown and had some grass and root matter present.
Naming NotesThe second name of Albus Dumbledore, and also a knight in Arthurian legend
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 9, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage94
Genome length (bp)47364
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCGGAGGGGCAT
GC Content69.6%
Sequencing Notesat position 16501 bp 25% of reads contain a C instead of consensus T
Fasta file available?Yes: Download fasta file
Characterization
ClusterEH
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes74
Number of tRNAs1
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Percival_1
(terminase small subunit)

Percival_2
(terminase large subunit)

Percival_3
(portal protein)

Percival_4
(ADP-ribosyltransferase domain and MuF-like fusion protein)

Percival_5

Percival_6
(scaffolding protein)

Percival_7
(major capsid protein)

Percival_8
(head-to-tail adaptor)

Percival_9

Percival_10

Percival_11
(tail terminator)

Percival_12
(major tail protein)

Percival_13
(tail assembly chaperone)

Percival_14
(tail assembly chaperone)

Percival_15
(tape measure protein)

Percival_16
(minor tail protein)

Percival_17
(minor tail protein)

Percival_18

Percival_19
(minor tail protein)

Percival_20
(minor tail protein)

Percival_21
(endolysin)

Percival_22

Percival_23

Percival_24

Percival_25
(deoxynucleoside monophosphate kinase)

Percival_26

Percival_27

Percival_28

Percival_29

Percival_30
(deoxycytidylate deaminase)

Percival_31

Percival_32

Percival_33
(HNH endonuclease)

Percival_34

Percival_35

Percival_36

Percival_37

Percival_38

Percival_39

Percival_40

Percival_41
(recombination directionality factor)

Percival_42

Percival_43
(NrdH-like glutaredoxin)

Percival_44

Percival_45

Percival_46
(holliday junction resolvase)

Percival_47
(DNA primase/helicase)

Percival_48

Percival_49
(DNA polymerase I)

Percival_50

Percival_51
(DNA binding protein)

Percival_52
(SprT-like protease)

Percival_53

Percival_54

Percival_55

Percival_56

Percival_57

Percival_76

Percival_59
(serine homologous recombinase)

Percival_60

Percival_61

Percival_62

Percival_63

Percival_64

Percival_65

Percival_66
(metallophosphoesterase)

Percival_67

Percival_68
(RtcB-like RNA ligase)

Percival_69
(helix-turn-helix DNA-binding domain protein)

Percival_70

Percival_71

Percival_72

Percival_73

Percival_74 — tRNA
(tRNA-Lys(ctt))

Percival_75
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH271308
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 8
Pitt Freezer Box Grid# C1
Available Files
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload