Detailed Information for Phage Percival |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Johnathon Schiebel |
Year Found | 2016 |
Location Found | Cabot, PA USA |
Finding Institution | University of Pittsburgh |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | Unknown |
Isolation Temperature | Not entered |
GPS Coordinates | 40.796111 N, 79.759722 W Map |
Discovery Notes | Was found in soil at the edge of an empty garden taken on July 16th, 2016. Weather was humid and 86 degrees Fahrenheit. Sample was taken from 2 inches below the surface of the soil. Soil was dark brown and had some grass and root matter present. |
Naming Notes | The second name of Albus Dumbledore, and also a knight in Arthurian legend |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Feb 9, 2017 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 94 |
Genome length (bp) | 47364 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | CGGAGGGGCAT |
GC Content | 69.6% |
Sequencing Notes | at position 16501 bp 25% of reads contain a C instead of consensus T |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EH |
Subcluster | -- |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 74 |
Number of tRNAs | 1 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MH271308 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
8 |
Pitt Freezer Box Grid# |
C1 |
Available Files |
EM Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |