Detailed Information for Phage Renaldo |
Discovery Information |
Isolation Host | Arthrobacter globiformis B-2979 |
Former names | RenaldoMoon |
Found By | Sam Rogers |
Year Found | 2023 |
Location Found | Ottawa, Canada |
Finding Institution | University of Ottawa |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 30°C |
GPS Coordinates | 44.418304 N, 76.220726 W Map |
Discovery Notes | Collected from the root ball of a basil plant sourced from a farm in Gananoque Ontario. |
Naming Notes | Named for the character RenaldoMoon aka Muta from the Ghibli film "The Cat Returns" |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 7, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 678 |
Genome length (bp) | 55183 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CGCCGGCCT |
GC Content | 51.1% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | AU |
Subcluster | AU6 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | University of Ottawa |
Annotation Status | Overdue (Expected completion by 8/31/2024) |
Plaque Notes | Varies between very small and medium sized plaques. |
Morphotype | Siphoviridae |
Number of Genes | 93 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
176 |
Pitt Freezer Box Grid# |
G7 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |