Detailed Information for Phage RootBeer | |
Discovery Information | |
Isolation Host | Arthrobacter globiformis B-2979 |
Found By | E. Alex Pray |
Year Found | 2023 |
Location Found | West Lafayette, IN United States |
Finding Institution | Purdue University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Unknown |
Isolation Temperature | 28°C |
GPS Coordinates | 40.44842 N, 86.94514 W Map |
Discovery Notes | Found in the pot of a plum tomato plant on 09/05/23 at 10:55am. Weather was sunny and 81 degrees Fahrenheit. |
Naming Notes | We like Root Beer (the soda). |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 3, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Sequencer Used | Illumina MiSeq |
Read Type | Single-end reads |
Read Length | 150 bp |
Approximate Shotgun Coverage | 1087 |
Genome length (bp) | 39355 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGCCCGTGTG |
GC Content | 65.2% |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | FA |
Subcluster | -- |
Cluster Life Cycle | Temperate |
Other Cluster Members | |
Annotating Institution | Purdue University |
Annotation Status | In GenBank |
Number of Genes | 55 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
Click to ViewRootBeer_1 RootBeer_2 RootBeer_3 RootBeer_4 RootBeer_5 RootBeer_6 RootBeer_7 RootBeer_8 RootBeer_9 RootBeer_10 RootBeer_11 RootBeer_12 RootBeer_13 RootBeer_14 RootBeer_15 RootBeer_16 RootBeer_17 RootBeer_18 RootBeer_19 RootBeer_20 RootBeer_21 RootBeer_22 RootBeer_23 RootBeer_24 RootBeer_25 RootBeer_26 RootBeer_27 RootBeer_28 RootBeer_29 RootBeer_30 RootBeer_31 RootBeer_32 RootBeer_33 RootBeer_34 RootBeer_35 RootBeer_36 RootBeer_37 RootBeer_38 RootBeer_39 RootBeer_40 RootBeer_41 RootBeer_42 RootBeer_43 RootBeer_44 RootBeer_45 RootBeer_46 RootBeer_47 RootBeer_48 RootBeer_49 RootBeer_50 RootBeer_51 RootBeer_52 RootBeer_53 RootBeer_54 RootBeer_55 |
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info | |
Uploaded to GenBank? | Yes |
GenBank Accession | PQ184833 |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Archived |
Pitt Freezer Box# | 187 |
Pitt Freezer Box Grid# | G6 |
Available Files | |
GenBank File for Phamerator | Download |