Arthrobacter phage Scavito
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Detailed Information for Phage Scavito
Discovery Information
Isolation HostArthrobacter sp. ATCC 21022
Found ByRenoy Roy
Year Found2015
Location FoundWest Chester, PA USA
Finding InstitutionCabrini University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates39.995002 N, 75.603738 W Map
Naming NotesWhen thinking about a name for my phage I really couldn't come to a conclusion. I let my cousin come up with a name for it and he chose to use Scavito from an old video game because it sounded cool.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 17, 2015
Sequencing FacilityNC State Genomic Sciences Laboratory
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage1273
Genome length (bp)70123
Character of genome endsCircularly Permuted
GC Content61.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterAR
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
Plaque NotesGrows without Calcium and in the presence of Calcium (5mM to 50 mM) at room temperature and 30 degrees C. Phage also grows in the presence of 5mM, 25mM and 50mM magnesium sulfate.
MorphotypeMyoviridae
Number of Genes112
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

Scavito_1

Scavito_2

Scavito_3
(terminase)

Scavito_4
(portal protein)

Scavito_5
(MuF-like minor capsid protein)

Scavito_6

Scavito_7

Scavito_8

Scavito_9

Scavito_10
(scaffolding protein)

Scavito_11
(capsid decoration protein)

Scavito_12
(major capsid protein)

Scavito_13

Scavito_14

Scavito_15
(minor tail protein)

Scavito_16

Scavito_17

Scavito_18
(tail sheath protein)

Scavito_19
(tail tube protein)

Scavito_20

Scavito_21

Scavito_22
(tape measure protein)

Scavito_23
(minor tail protein)

Scavito_24
(minor tail protein)

Scavito_25

Scavito_26
(minor tail protein)

Scavito_27
(minor tail protein)

Scavito_28

Scavito_29

Scavito_30

Scavito_31
(endolysin)

Scavito_32
(holin)

Scavito_33

Scavito_34

Scavito_35

Scavito_36

Scavito_37
(helix-turn-helix DNA binding domain protein)

Scavito_38
(baseplate wedge protein)

Scavito_39
(baseplate J protein)

Scavito_40

Scavito_41

Scavito_42

Scavito_43
(MRE11 double-strand break endo/exonuclease)

Scavito_44

Scavito_45

Scavito_46
(RecE-like exonuclease)

Scavito_47
(RecT-like ssDNA binding protein)

Scavito_48

Scavito_49

Scavito_50

Scavito_51

Scavito_52

Scavito_53

Scavito_54

Scavito_55

Scavito_56

Scavito_57

Scavito_58

Scavito_59

Scavito_60

Scavito_61

Scavito_62

Scavito_63

Scavito_64

Scavito_65

Scavito_66

Scavito_67

Scavito_68

Scavito_69

Scavito_70

Scavito_71

Scavito_72

Scavito_73
(endolysin)

Scavito_74

Scavito_75

Scavito_76

Scavito_77

Scavito_78

Scavito_79

Scavito_80

Scavito_81
(DNA methylase)

Scavito_82

Scavito_83
(DNA methylase)

Scavito_84

Scavito_85

Scavito_86

Scavito_87

Scavito_88

Scavito_89

Scavito_90
(Cas4 family exonuclease)

Scavito_91
(DNA helicase)

Scavito_92

Scavito_93
(nucleoside deoxyribosyltransferase)

Scavito_94

Scavito_95

Scavito_96
(RusA-like resolvase)

Scavito_97

Scavito_98

Scavito_99

Scavito_100

Scavito_101
(HNH endonuclease)

Scavito_102
(ssDNA binding protein)

Scavito_103

Scavito_104

Scavito_105
(DNA polymerase III sliding clamp)

Scavito_106

Scavito_107

Scavito_108

Scavito_109

Scavito_110

Scavito_111
(protease)

Scavito_112
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMF185724
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Designator Cabrini College
SEA Lysate Titer 1.46E8
Date of SEA Lysate Titering Jul 10, 2015
Pitt Freezer Box# 149
Pitt Freezer Box Grid# D5
Available Files
Plaque PictureDownload
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload