| Detailed Information for Phage SilentRX | |
| Discovery Information | |
| Isolation Host | Arthrobacter globiformis B-2979 |
| Found By | Ethan Edwards |
| Year Found | 2019 |
| Location Found | Manchester, NH United States |
| Finding Institution | University of New Hampshire at Manchester |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 18°C |
| GPS Coordinates | 42.994046 N, 71.512123 W Map |
| Discovery Notes | Location Descriptors: - Backyard of a suburban household - Area sampled from is was previously a plant grow bed and before that there was a sand pit above Soil Descriptors: - Approximately 60% sandy soil and 40% coarse soil - Slightly moist, as it was in the morning and dew was fresh on the ground - Flakey |
| Naming Notes | Due to difficulties getting the phage to represent itself on the bacterial lawn (personal error), and the practice of using phage to treat bacterial infections in both animals and humans. I thought it appropriate to name the phage SilentRX. As it could be administered as "the Silent treatment." |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 22, 2020 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 1301 |
| Genome length (bp) | 65232 |
| Character of genome ends | Direct Terminal Repeat |
| Direct Terminal Repeat Length | 838 bp |
| GC Content | 67.1% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | AP |
| Subcluster | AP4 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members | |
| Annotating Institution | University of New Hampshire at Manchester |
| Annotation Status | In GenBank |
| Plaque Notes | Size (Range): 0.2 mm to 1.2 mm [clear] Details: 0.1 mm halo [turbid] Other Notes: Despite range in sizes which only increased after purification, the morphology aside stayed very constant through all stages of processing. |
| Number of Genes | 102 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewSilentRX_1 SilentRX_2 SilentRX_3 SilentRX_4 SilentRX_5 SilentRX_6 SilentRX_7 SilentRX_8 SilentRX_9 SilentRX_10 SilentRX_11 SilentRX_12 SilentRX_13 SilentRX_14 SilentRX_15 SilentRX_16 SilentRX_17 SilentRX_18 SilentRX_19 SilentRX_20 SilentRX_21 SilentRX_22 SilentRX_23 SilentRX_24 SilentRX_25 SilentRX_26 SilentRX_27 SilentRX_28 SilentRX_29 SilentRX_30 SilentRX_31 SilentRX_32 SilentRX_33 SilentRX_34 SilentRX_35 SilentRX_36 SilentRX_37 SilentRX_38 SilentRX_39 SilentRX_40 SilentRX_41 SilentRX_42 SilentRX_43 SilentRX_44 SilentRX_45 SilentRX_46 SilentRX_47 SilentRX_48 SilentRX_49 SilentRX_50 SilentRX_51 SilentRX_52 SilentRX_53 SilentRX_54 SilentRX_55 SilentRX_56 SilentRX_57 SilentRX_58 SilentRX_59 SilentRX_60 SilentRX_61 SilentRX_62 SilentRX_63 SilentRX_64 SilentRX_65 SilentRX_66 SilentRX_67 SilentRX_68 SilentRX_69 SilentRX_70 SilentRX_71 SilentRX_72 SilentRX_73 SilentRX_74 SilentRX_75 SilentRX_76 SilentRX_77 SilentRX_78 SilentRX_79 SilentRX_80 SilentRX_81 SilentRX_82 SilentRX_83 SilentRX_84 SilentRX_85 SilentRX_86 SilentRX_87 SilentRX_88 SilentRX_89 SilentRX_90 SilentRX_91 SilentRX_92 SilentRX_93 SilentRX_94 SilentRX_95 SilentRX_96 SilentRX_97 SilentRX_98 SilentRX_99 SilentRX_100 SilentRX_101 SilentRX_102 |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MW862992 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Lysate Titer | 1.11x10^10 pfu/ml |
| Pitt Freezer Box# | 116 |
| Pitt Freezer Box Grid# | B10 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
