Gordonia phage SpeedDemon
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Detailed Information for Phage SpeedDemon
Discovery Information
Isolation HostGordonia terrae 3612
Found ByDevin Kelley, Shane Spitz
Year Found2019
Location FoundNewburgh, NY United States
Finding InstitutionMount Saint Mary College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates41.515507 N, 74.013728 W Map
Discovery NotesFound in the dirt outside of dormitory near shrubbery.
Naming NotesFirst initial of our first names.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 16, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage69
Genome length (bp)94031
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGCAGCACTC
GC Content64.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDL
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionMount Saint Mary College
Annotation StatusIn GenBank
Number of Genes163
Number of tRNAs2
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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SpeedDemon_10

SpeedDemon_20

SpeedDemon_30
(thymidylate synthase)

SpeedDemon_40
(phosphoribosyl pyrophosphate transferase)

SpeedDemon_50
(nicotinate ribosyltransferase)

SpeedDemon_60

SpeedDemon_70

SpeedDemon_80

SpeedDemon_90
(HNH endonuclease)

SpeedDemon_100
(HNH endonuclease)

SpeedDemon_110 — tRNA
(tRNA-Asn(gtt))

SpeedDemon_120

SpeedDemon_130
(terminase)

SpeedDemon_140
(portal protein)

SpeedDemon_150
(MuF-like minor capsid protein)

SpeedDemon_160
(scaffolding protein)

SpeedDemon_170
(capsid decoration protein)

SpeedDemon_180
(major capsid protein)

SpeedDemon_190

SpeedDemon_200
(head-to-tail adaptor)

SpeedDemon_210
(head-to-tail stopper)

SpeedDemon_220

SpeedDemon_230
(tail terminator)

SpeedDemon_240
(endonuclease VII)

SpeedDemon_250
(major tail protein)

SpeedDemon_260
(glycoside hydrolase)

SpeedDemon_270

SpeedDemon_280
(tail assembly chaperone)

SpeedDemon_290
(tail assembly chaperone)

SpeedDemon_300
(tape measure protein)

SpeedDemon_310
(minor tail protein)

SpeedDemon_320
(minor tail protein)

SpeedDemon_330
(lysin A, protease C39 domain)

SpeedDemon_340
(lysin A, L-Ala-D-Glu peptidase domain)

SpeedDemon_350
(holin)

SpeedDemon_360

SpeedDemon_370

SpeedDemon_380
(minor tail protein)

SpeedDemon_390
(minor tail protein)

SpeedDemon_400

SpeedDemon_410

SpeedDemon_420
(minor tail protein)

SpeedDemon_430

SpeedDemon_440
(Lsr2-like DNA bridging protein)

SpeedDemon_450

SpeedDemon_460

SpeedDemon_470

SpeedDemon_480
(exonuclease)

SpeedDemon_490
(exonuclease)

SpeedDemon_500

SpeedDemon_510

SpeedDemon_520

SpeedDemon_530

SpeedDemon_540

SpeedDemon_550

SpeedDemon_560
(DprA-like DNA processing chain A)

SpeedDemon_570

SpeedDemon_580

SpeedDemon_590

SpeedDemon_600

SpeedDemon_610

SpeedDemon_620

SpeedDemon_630
(HNH endonuclease)

SpeedDemon_640 — tRNA
(tRNA-Met(cat))

SpeedDemon_650

SpeedDemon_660
(tyrosine integrase)

SpeedDemon_670

SpeedDemon_680
(immunity repressor)

SpeedDemon_690

SpeedDemon_700

SpeedDemon_710

SpeedDemon_720

SpeedDemon_730
(protease)

SpeedDemon_740
(holliday junction resolvase)

SpeedDemon_750
(RusA-like resolvase)

SpeedDemon_760

SpeedDemon_770

SpeedDemon_780

SpeedDemon_790
(WhiB family transcription factor)

SpeedDemon_800

SpeedDemon_810

SpeedDemon_820

SpeedDemon_830

SpeedDemon_840

SpeedDemon_850
(ERF family ssDNA binding protein)

SpeedDemon_860
(NrdH-like glutaredoxin)

SpeedDemon_870
(DNA helicase)

SpeedDemon_880

SpeedDemon_890
(helix-turn-helix DNA-binding domain protein)

SpeedDemon_900
(helix-turn-helix DNA-binding domain protein)

SpeedDemon_910

SpeedDemon_920

SpeedDemon_930

SpeedDemon_940
(helix-turn-helix DNA-binding domain protein)

SpeedDemon_950
(RecT-like DNA pairing protein)

SpeedDemon_960
(exonuclease)

SpeedDemon_970
(HNH endonuclease)

SpeedDemon_980

SpeedDemon_990

SpeedDemon_1000

SpeedDemon_1010
(nucleotidyl transferase)

SpeedDemon_1020

SpeedDemon_1030
(RNA ligase)

SpeedDemon_1040
(HNH endonuclease)

SpeedDemon_1050

SpeedDemon_1060

SpeedDemon_1070

SpeedDemon_1080

SpeedDemon_1090

SpeedDemon_1100

SpeedDemon_1110
(HNH endonuclease)

SpeedDemon_1120

SpeedDemon_1130
(MazG-like nucleotide pyrophosphohydrolase)

SpeedDemon_1140

SpeedDemon_1150
(polynucleotide kinase)

SpeedDemon_1160
(HNH endonuclease)

SpeedDemon_1170

SpeedDemon_1180

SpeedDemon_1190

SpeedDemon_1200

SpeedDemon_1210

SpeedDemon_1220

SpeedDemon_1230

SpeedDemon_1240

SpeedDemon_1250

SpeedDemon_1260

SpeedDemon_1270

SpeedDemon_1280

SpeedDemon_1290

SpeedDemon_1300

SpeedDemon_1310

SpeedDemon_1320

SpeedDemon_1330

SpeedDemon_1340
(lysin B)

SpeedDemon_1350

SpeedDemon_1360

SpeedDemon_1370
(toxin)

SpeedDemon_1380
(antitoxin)

SpeedDemon_1390

SpeedDemon_1400

SpeedDemon_1410

SpeedDemon_1420

SpeedDemon_1430

SpeedDemon_1440

SpeedDemon_1450

SpeedDemon_1460

SpeedDemon_1470

SpeedDemon_1480

SpeedDemon_1490

SpeedDemon_1500

SpeedDemon_1510

SpeedDemon_1520

SpeedDemon_1530

SpeedDemon_1540

SpeedDemon_1550

SpeedDemon_1560

SpeedDemon_1570

SpeedDemon_1580

SpeedDemon_1590

SpeedDemon_1600

SpeedDemon_1610
(ArdA-like antirestriction protein)

SpeedDemon_1620

SpeedDemon_1630

SpeedDemon_1640

SpeedDemon_1650

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMT657339
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 3 x 10^9
Pitt Freezer Box# 109
Pitt Freezer Box Grid# A2
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload