Detailed Information for Phage Teacup |
Discovery Information |
Isolation Host | Arthrobacter sp. ATCC 21022 |
Found By | Lauren Otto |
Year Found | 2015 |
Location Found | Lewisburg, PA USA |
Finding Institution | Bucknell University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 40.9639 N, 76.8881 W Map |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Feb 9, 2016 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 2225 |
Genome length (bp) | 58238 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CGCCGGCCT |
GC Content | 49.8% |
Sequencing Notes | at position 26947 26% of reads contain G rather than consensus A |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | AU |
Subcluster | AU1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 88 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MF140432 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
106000000 |
Pitt Freezer Box# |
22 |
Pitt Freezer Box Grid# |
B11 |
Available Files |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |