Microbacterium phage UtzChips
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Detailed Information for Phage UtzChips
Discovery Information
Isolation HostMicrobacterium sp. ISAT203
Found ByLucy Utz
Year Found2019
Location FoundHarrisonburg, VA US
Finding InstitutionJames Madison University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature24°C
GPS Coordinates38.4351 N, 78.8698 W Map
Discovery NotesFrom garden outside science building. About 70 degrees.
Naming NotesLucy Utz wanted to name it simply "Chips" but that was taken, so she added "Utz" to the beginning to make it "UtzChips"
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJun 15, 2022
Sequencing FacilityNC State Genomic Sciences Laboratory
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage673
Genome length (bp)46822
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCGAGGAGGCAT
GC Content69.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEH
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionJames Madison University
Annotation StatusIn GenBank
Plaque Notes2 mm, homogenous clear plaques
MorphotypeSiphoviridae
Number of Genes77
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

UtzChips_1
(terminase small subunit)

UtzChips_2
(terminase large subunit)

UtzChips_3
(portal protein)

UtzChips_4
(minor capsid protein)

UtzChips_5
(scaffolding protein)

UtzChips_6
(major capsid protein)

UtzChips_7
(head-to-tail adaptor)

UtzChips_8
(head-to-tail stopper)

UtzChips_9

UtzChips_10
(tail terminator)

UtzChips_11
(major tail protein)

UtzChips_12
(tail assembly chaperone)

UtzChips_13
(tail assembly chaperone)

UtzChips_14
(tape measure protein)

UtzChips_15
(minor tail protein)

UtzChips_16
(minor tail protein)

UtzChips_17

UtzChips_18
(minor tail protein)

UtzChips_19
(minor tail protein)

UtzChips_20
(endolysin)

UtzChips_21

UtzChips_22
(holin)

UtzChips_23

UtzChips_24
(deoxynucleoside monophosphate kinase)

UtzChips_25

UtzChips_26
(exonuclease)

UtzChips_27
(nucleoside deoxyribosyltransferase)

UtzChips_28

UtzChips_29

UtzChips_30
(LAGLIDADG endonuclease)

UtzChips_31

UtzChips_32

UtzChips_33

UtzChips_34

UtzChips_35

UtzChips_36

UtzChips_37

UtzChips_38

UtzChips_39
(recombination directionality factor)

UtzChips_40

UtzChips_41
(NrdH-like glutaredoxin)

UtzChips_42

UtzChips_43
(holliday junction resolvase)

UtzChips_44
(DNA primase/helicase)

UtzChips_45

UtzChips_46

UtzChips_47
(DNA polymerase I)

UtzChips_48

UtzChips_49
(DNA binding protein)

UtzChips_50

UtzChips_51
(SprT-like protease)

UtzChips_52

UtzChips_53

UtzChips_54

UtzChips_55

UtzChips_56

UtzChips_57

UtzChips_58

UtzChips_59
(serine integrase)

UtzChips_60

UtzChips_61

UtzChips_62

UtzChips_63

UtzChips_64

UtzChips_65

UtzChips_66

UtzChips_67
(metallophosphoesterase)

UtzChips_68

UtzChips_69
(RtcB-like RNA ligase)

UtzChips_70

UtzChips_71

UtzChips_72

UtzChips_73

UtzChips_74

UtzChips_75

UtzChips_76

UtzChips_77
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOQ190482
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 172
Pitt Freezer Box Grid# E4
Available Files
GenBank File for PhameratorDownload