Detailed Information for Phage UtzChips |
Discovery Information |
Isolation Host | Microbacterium sp. ISAT203 |
Found By | Lucy Utz |
Year Found | 2019 |
Location Found | Harrisonburg, VA US |
Finding Institution | James Madison University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 24°C |
GPS Coordinates | 38.4351 N, 78.8698 W Map |
Discovery Notes | From garden outside science building. About 70 degrees. |
Naming Notes | Lucy Utz wanted to name it simply "Chips" but that was taken, so she added "Utz" to the beginning to make it "UtzChips" |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jun 15, 2022 |
Sequencing Facility | NC State Genomic Sciences Laboratory |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 673 |
Genome length (bp) | 46822 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | CGAGGAGGCAT |
GC Content | 69.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EH |
Subcluster | -- |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | James Madison University |
Annotation Status | In GenBank |
Plaque Notes | 2 mm, homogenous clear plaques |
Morphotype | Siphoviridae |
Number of Genes | 77 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | OQ190482 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
172 |
Pitt Freezer Box Grid# |
E4 |
Available Files |
GenBank File for Phamerator | Download |