| Detailed Information for Phage Vopal | |
| Discovery Information | |
| Isolation Host | Arthrobacter globiformis B-2979 |
| Found By | Sophia Vopal |
| Year Found | 2024 |
| Location Found | Pittsburgh, PA United States |
| Finding Institution | Chatham University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 92°C |
| GPS Coordinates | 40.447851 N, 79.923744 E Map |
| Discovery Notes | Found underneath a tree near leaf decay. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 3, 2025 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina NextSeq 1000 |
| Read Type | Single-end reads |
| Read Length | 100 bp |
| Approximate Shotgun Coverage | 3643 |
| Genome length (bp) | 53758 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 9 bases |
| Overhang Sequence | CGCCGGTGA |
| GC Content | 62.6% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | AY |
| Subcluster | -- |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
Click to ViewAbbyDaisy AdaS Aikyam Anekin Auxilium BenchScraper Bhageatrice BillyTP BlueShadow CookieBear EvePickles Faja Globfish Gorpy Hestia Hillester Isolde JellyBread Lawnathon MaterMagnus MidnightRain MUWow Persistence Phrank15 RadFad Raphaella Raqqa Richie Sakai Sashimi Seahorse Shukran SpicyFrank ThayneTheZag Tiff81 Vopal Windest YoungHarleezy |
| Annotating Institution | Chatham University |
| Annotation Status | Being Annotated (Expected completion by 5/1/2025) |
| Number of Genes | 95 |
| Number of tRNAs | 2 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewVopal_1 Vopal_2 Vopal_3 Vopal_4 Vopal_5 Vopal_6 — tRNA Vopal_7 Vopal_8 Vopal_9 Vopal_10 Vopal_11 Vopal_12 Vopal_13 Vopal_14 Vopal_15 Vopal_16 Vopal_17 Vopal_18 Vopal_19 Vopal_20 Vopal_21 Vopal_22 Vopal_23 Vopal_24 Vopal_25 Vopal_26 Vopal_27 Vopal_28 Vopal_29 Vopal_30 Vopal_31 Vopal_32 Vopal_33 Vopal_34 Vopal_35 Vopal_36 Vopal_37 Vopal_38 Vopal_39 Vopal_40 Vopal_41 Vopal_42 Vopal_43 Vopal_44 Vopal_45 Vopal_46 Vopal_47 Vopal_48 Vopal_49 Vopal_50 Vopal_51 Vopal_52 Vopal_53 Vopal_54 Vopal_55 Vopal_56 Vopal_57 Vopal_58 Vopal_59 Vopal_60 Vopal_61 Vopal_62 Vopal_63 Vopal_64 Vopal_65 Vopal_66 Vopal_67 Vopal_68 Vopal_69 Vopal_70 Vopal_71 Vopal_72 Vopal_73 Vopal_74 Vopal_75 Vopal_76 Vopal_77 Vopal_78 Vopal_79 Vopal_80 Vopal_81 Vopal_82 Vopal_83 Vopal_84 Vopal_85 Vopal_86 Vopal_87 Vopal_88 Vopal_89 Vopal_90 Vopal_91 Vopal_92 Vopal_93 — tRNA Vopal_94 Vopal_95 Vopal_96 Vopal_97 |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Not in Pitt Archives |