Arthrobacter phage Yavru
Know something about this phage that we don't? Modify its data.
| Detailed Information for Phage Yavru | |
| Discovery Information | |
| Isolation Host | Arthrobacter globiformis B-2979 |
| Found By | Meliha Ulker |
| Year Found | 2019 |
| Location Found | Bedford, NH United States |
| Finding Institution | University of New Hampshire at Manchester |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 21°C |
| GPS Coordinates | 42.958 N, 71.5642 W Map |
| Discovery Notes | The soil was firm and grainy. It was found in a dead garden with lots of worms. |
| Naming Notes | The meaning of Yavru is baby in Turkish. This name was chosen due to its small and round plaque morphology. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 22, 2020 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 5083 |
| Genome length (bp) | 15193 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 15 bases |
| Overhang Sequence | CCACGGTCCCCGTCC |
| GC Content | 64.3% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | FE |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
Click to View |
| Annotating Institution | University of New Hampshire at Manchester |
| Annotation Status | In GenBank |
| Plaque Notes | Plaques are clear in the center and fuzzy around the edges, the plaques are very small in size around 1 mm in diameter. |
| Morphotype | Siphoviridae |
| Number of Genes | 23 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewYavru_1 Yavru_2 Yavru_3 Yavru_4 Yavru_5 Yavru_6 Yavru_7 Yavru_8 Yavru_9 Yavru_10 Yavru_11 Yavru_12 Yavru_13 Yavru_14 Yavru_15 Yavru_16 Yavru_17 Yavru_18 Yavru_19 Yavru_20 Yavru_21 Yavru_22 Yavru_23 |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MT889364 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Lysate Titer | 5x10^12pfu/ml |
| Pitt Freezer Box# | 116 |
| Pitt Freezer Box Grid# | B12 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
