Arthrobacter phage CabbageMan
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Detailed Information for Phage CabbageMan | |
Discovery Information | |
Isolation Host | Arthrobacter globiformis B-2979 |
Found By | Ximena Iraheta |
Year Found | 2023 |
Location Found | Montreal, Canada |
Finding Institution | McGill University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 19°C |
GPS Coordinates | 45.51499 N, 73.81362 W Map |
Discovery Notes | September 20th at 12h11pm, it was a sunny and warm day. This moist, organic soil sample was collected by digging 3 inches deep in a flower garden at a park near a river shore. The coordinates of the soil sample collection site are 45.51499 °N and 73.81362 °W. It was stored in a conical tube in a room at 22 °C for about 24 hours. A direct isolation protocol was performed the next day. |
Naming Notes | It was named after someone special who supported me throughout the semester. |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 2, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 4281 |
Genome length (bp) | 15612 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 15 bases |
Overhang Sequence | CCCACGTATACCGTCC |
GC Content | 67.3% |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | FE |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
Click to View |
Annotating Institution | McGill University |
Annotation Status | Being Annotated (Expected completion by 5/10/2024) |
Plaque Notes | It is a plaque with clear center, with a turbid halo and smooth margin. |
Has been Phamerated? | Yes |
Gene List |
Click to ViewCabbageMan_Draft_1 CabbageMan_Draft_2 CabbageMan_Draft_3 CabbageMan_Draft_4 CabbageMan_Draft_5 CabbageMan_Draft_6 CabbageMan_Draft_7 CabbageMan_Draft_8 CabbageMan_Draft_9 CabbageMan_Draft_10 CabbageMan_Draft_11 CabbageMan_Draft_12 CabbageMan_Draft_13 CabbageMan_Draft_14 CabbageMan_Draft_15 CabbageMan_Draft_16 CabbageMan_Draft_17 CabbageMan_Draft_18 CabbageMan_Draft_19 CabbageMan_Draft_20 CabbageMan_Draft_21 CabbageMan_Draft_22 CabbageMan_Draft_23 CabbageMan_Draft_24 CabbageMan_Draft_25 |
Publication Info | |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Archived |
Pitt Freezer Box# | 183 |
Pitt Freezer Box Grid# | H3 |
Available Files | |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |