Gordonia phage NatB6
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Detailed Information for Phage NatB6
Discovery Information
Isolation HostGordonia terrae 3612
Found ByNatalie Burkert
Year Found2017
Location FoundAudubon, PA United States
Finding InstitutionSaint Joseph's University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.141363 N, 75.426641 W Map
Discovery NotesSoil was collected in my backyard in a garden. The soil was dry and from a depth of 11 cm down. The date collected was August 25, 2017 at 8:55 am. It was sunny outside and 18.33 degrees Celsius.

The high titer lysate that will be sent for archiving is 1.5 • 10^9.
Naming NotesIt is based on my name and it was available.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 7, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage234
Genome length (bp)67081
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGCCGCGTAC
GC Content65.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCR
SubclusterCR2
Cluster Life CycleLytic
Other Cluster Members
Annotation StatusIn GenBank
Plaque NotesThe plaques were small, round, and clear. The edges were a little fuzzy.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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NatB6_1
(HNH endonuclease)

NatB6_2
(terminase small subunit)

NatB6_3

NatB6_4

NatB6_5

NatB6_6

NatB6_7

NatB6_8
(membrane protein)

NatB6_9
(toxin in toxin/antitoxin system, HicA-like)

NatB6_10

NatB6_11

NatB6_12

NatB6_13
(membrane protein)

NatB6_14

NatB6_15

NatB6_16

NatB6_17
(membrane protein)

NatB6_18

NatB6_19
(lysin B)

NatB6_20

NatB6_21
(major tail protein)

NatB6_22

NatB6_23
(HNH endonuclease)

NatB6_24
(terminase large subunit)

NatB6_25
(portal protein)

NatB6_26
(capsid maturation protease)

NatB6_27
(scaffolding protein)

NatB6_28
(capsid decoration protein)

NatB6_29
(major capsid protein)

NatB6_30

NatB6_31

NatB6_32

NatB6_33

NatB6_34

NatB6_35
(major tail protein)

NatB6_36

NatB6_37
(tail assembly chaperone)

NatB6_38
(tail assembly chaperone)

NatB6_39
(tape measure protein)

NatB6_40
(minor tail protein)

NatB6_41
(minor tail protein)

NatB6_42
(minor tail protein)

NatB6_43
(minor tail protein)

NatB6_44

NatB6_45

NatB6_46

NatB6_47
(lysin A, protease M15 domain)

NatB6_48
(lysin A, glycosyl hydrolase domain)

NatB6_49
(holin)

NatB6_50
(membrane protein)

NatB6_51
(membrane protein)

NatB6_52
(DNA primase/polymerase)

NatB6_53

NatB6_54
(WhiB family transcription factor)

NatB6_55

NatB6_56
(helix-turn-helix DNA binding domain protein)

NatB6_57
(RuvC-like resolvase)

NatB6_58

NatB6_59

NatB6_60
(DnaE-like DNA polymerase III (alpha))

NatB6_61

NatB6_62

NatB6_63

NatB6_64

NatB6_65
(RecA-like DNA recombinase)

NatB6_66
(nuclease)

NatB6_67

NatB6_68

NatB6_69

NatB6_70

NatB6_71

NatB6_72
(helicase)

NatB6_73
(WhiB family transcription factor)

NatB6_74

NatB6_75
(membrane protein)

NatB6_76

NatB6_77

NatB6_78

NatB6_79

NatB6_80

NatB6_81

NatB6_82

NatB6_83

NatB6_84

NatB6_85

NatB6_86

NatB6_87

NatB6_88

NatB6_89

NatB6_90

NatB6_91

NatB6_92

NatB6_93

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH536824
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 50
Pitt Freezer Box Grid# F9
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload