Gordonia phage NorManre
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Detailed Information for Phage NorManre
Discovery Information
Isolation HostGordonia rubripertincta NRRL B-16540
Found ByGregory Kayayan
Year Found2021
Location FoundAlbany, NY United States
Finding InstitutionAlbany College of Pharmacy and Health Sciences
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature27°C
GPS Coordinates42.689103 N, 73.773908 W Map
Discovery NotesThe soil was collected from Executive Woods complex, at 4 Palisades Drive on top of the retaining wall in the parking lot. The soil was moist and not exposed to a lot of sunlight under the weeds and plants. It was taken around 3-6 inches from the surface and did not consist of a lot of weeds due to the depth of the soil.
Naming Notes"Nor" means "New" in Armenian

"Manre" is a broadly used term for "germs" or anything that is wanted to be cleaned. Used in Armenian communities in Damascus Syria.

This name was chosen as a representation of heritage and intrigue in research.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 17, 2023
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage955
Genome length (bp)68848
Character of genome endsCircularly Permuted
GC Content58.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDV
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members
Annotating InstitutionAlbany College of Pharmacy and Health Sciences
Annotation StatusIn GenBank
Plaque NotesThe plaques are small and clear, with sizes ranging from .4mm to 1.1mm, with .8mm being the average size measured.
Has been Phamerated?Yes
Gene List

Click to View

NorManre_1

NorManre_2
(terminase)

NorManre_3
(portal protein)

NorManre_4
(minor tail protein)

NorManre_5

NorManre_6

NorManre_7

NorManre_8

NorManre_9

NorManre_10

NorManre_11

NorManre_12
(metalloprotease)

NorManre_13
(capsid maturation protease)

NorManre_14

NorManre_15
(minor capsid protein)

NorManre_16
(major capsid protein)

NorManre_17

NorManre_18

NorManre_19

NorManre_20
(head-to-tail stopper)

NorManre_21

NorManre_22
(tail terminator)

NorManre_23

NorManre_24

NorManre_25
(major tail protein)

NorManre_26

NorManre_27

NorManre_28
(tape measure protein)

NorManre_29
(minor tail protein)

NorManre_30
(minor tail protein)

NorManre_31
(minor tail protein)

NorManre_32

NorManre_33

NorManre_34

NorManre_35

NorManre_36

NorManre_37
(lysin A)

NorManre_38
(holin)

NorManre_39

NorManre_40

NorManre_41

NorManre_42

NorManre_43

NorManre_44

NorManre_45

NorManre_46

NorManre_47

NorManre_48

NorManre_49

NorManre_50

NorManre_51

NorManre_52

NorManre_53

NorManre_54

NorManre_55

NorManre_56

NorManre_57

NorManre_58

NorManre_59

NorManre_60

NorManre_61

NorManre_62

NorManre_63
(DNA helicase)

NorManre_64
(DNA binding protein)

NorManre_65

NorManre_66

NorManre_67

NorManre_68

NorManre_69
(RecB-like exonuclease/helicase)

NorManre_70

NorManre_71
(RecA-like DNA recombinase)

NorManre_72

NorManre_73
(oxidoreductase)

NorManre_74
(nucleotide pyrophosphohydrolase)

NorManre_75

NorManre_76

NorManre_77
(methyltransferase)

NorManre_78

NorManre_79
(oxidoreductase)

NorManre_80

NorManre_81

NorManre_82

NorManre_83
(HNH endonuclease)

NorManre_84
(DnaE-like DNA polymerase III alpha)

NorManre_85
(MazG-like nucleotide pyrophosphohydrolase)

NorManre_86

NorManre_87

NorManre_88
(ThyX-like thymidylate synthase)

NorManre_89

NorManre_90
(RuvC-like resolvase)

NorManre_91
(lysin B)

NorManre_92

NorManre_93
(DNA primase/helicase)

NorManre_94

NorManre_95

NorManre_96

NorManre_97

NorManre_98

NorManre_99

NorManre_100

NorManre_101

NorManre_102

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOR553907
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 136
Pitt Freezer Box Grid# D10
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload