Detailed Information for Phage Abscondus |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Found By | Theo Courteaux |
Year Found | 2023 |
Location Found | Shreveport, LA USA |
Finding Institution | University of Louisiana at Monroe |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 32.49899 N, 93.72142 W Map |
Discovery Notes | Purified from a mixed lysate sample sent in for sequencing. This phage is one of four phages from the original Shameless DNA sample. |
Naming Notes | From the Latin: hidden, concealed. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Mar 21, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 67 |
Genome length (bp) | 92481 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGCGACGCTC |
GC Content | 61.9% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | CQ |
Subcluster | CQ1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | University of Louisiana at Monroe |
Annotation Status | Awaiting_QC |
Morphotype | Siphoviridae |
Number of Genes | 179 |
Number of tRNAs | 6 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |