| Detailed Information for Phage Argena | |
| Discovery Information | |
| Isolation Host | Gordonia rubripertincta NRRL B-16540 |
| Found By | Jana Elenany |
| Year Found | 2025 |
| Location Found | Pittsburgh, PA United States |
| Finding Institution | University of Pittsburgh |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 30°C |
| GPS Coordinates | 40.439 N, 79.948 W Map |
| Discovery Notes | Group members: Esther Yoo, Tom Meng The soil came from an indoor, maintained facility. Small fern type of plant from Phipps Conservatory. Obtained from a well insulated facility, with certain gas present in the place, very rich dark soil, well watered tree plant. Found in Spring of 2025 |
| Naming Notes | A tree from Phipps, we love trees! |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Aug 6, 2025 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina NextSeq 1000 |
| Read Type | Single-end reads |
| Read Length | 300 bp |
| Approximate Shotgun Coverage | 3178 |
| Genome length (bp) | 89560 |
| Character of genome ends | Circularly Permuted |
| GC Content | 60.3% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | DQ |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members | |
| Annotating Institution | University of Pittsburgh |
| Annotation Status | Being Annotated (Expected completion by 12/31/2025) |
| Plaque Notes | Clear, small circular plaques. |
| Number of Genes | 126 |
| Number of tRNAs | 1 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewArgena_1 Argena_2 Argena_3 Argena_4 Argena_5 Argena_6 Argena_7 Argena_8 Argena_9 Argena_10 Argena_11 Argena_12 Argena_13 Argena_14 Argena_15 Argena_16 Argena_17 Argena_18 Argena_19 Argena_20 Argena_21 Argena_22 Argena_23 Argena_24 Argena_25 Argena_26 Argena_27 Argena_28 Argena_29 Argena_30 Argena_31 Argena_32 Argena_33 Argena_34 Argena_35 Argena_36 Argena_37 Argena_38 Argena_39 Argena_40 Argena_41 Argena_42 Argena_43 Argena_44 Argena_45 Argena_46 Argena_47 Argena_48 Argena_49 Argena_50 Argena_51 Argena_52 Argena_53 Argena_54 Argena_55 Argena_56 Argena_57 Argena_58 Argena_59 Argena_60 Argena_61 Argena_62 Argena_63 Argena_64 Argena_65 Argena_66 Argena_67 Argena_68 Argena_69 Argena_70 Argena_71 Argena_72 Argena_73 Argena_74 Argena_75 Argena_76 Argena_77 Argena_78 Argena_79 Argena_80 Argena_81 Argena_82 Argena_83 Argena_84 Argena_85 Argena_86 Argena_87 Argena_88 Argena_89 Argena_90 Argena_91 Argena_92 Argena_93 Argena_94 Argena_95 Argena_96 Argena_97 Argena_98 Argena_99 Argena_100 Argena_101 Argena_102 Argena_103 Argena_104 Argena_105 Argena_106 Argena_107 Argena_108 Argena_109 Argena_110 Argena_111 Argena_112 Argena_113 Argena_114 Argena_115 Argena_116 Argena_117 Argena_118 Argena_119 Argena_120 Argena_121 Argena_122 Argena_123 Argena_124 Argena_125 — tRNA Argena_126 Argena_127 |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 216 |
| Pitt Freezer Box Grid# | B9 |
| Available Files | |
| Plaque Picture | Download |
