Detailed Information for Phage Oogie |
Discovery Information |
Isolation Host | Gordonia rubripertincta NRRL B-16540 |
Found By | Mikayla Cline |
Year Found | 2021 |
Location Found | Georgetown, IN United States |
Finding Institution | Indiana University Southeast |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 25°C |
GPS Coordinates | 38.293056 N, 85.966389 W Map |
Discovery Notes | The soil was found in Georgetown, Indiana 47122. It was extracted from an old, abandoned strawberry patch next to the side of a house. The soil was very dry and hard to get up. It was also under a tarp and next to a concrete sidewalk. There were many weeds and other forms of greenery in the soil surrounding it. The collected sample had lots of roots and small sticks as well. |
Naming Notes | Due to the upcoming holiday (Halloween), I chose a name from one of my favorite Halloween movies (The Nightmare Before Christmas). My favorite character is Oogie Boogie so I named the sample Oogie. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Apr 27, 2023 |
Sequencing Facility | NC State Genomic Sciences Laboratory |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 2534 |
Genome length (bp) | 90938 |
Character of genome ends | Circularly Permuted |
GC Content | 60.3% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | DQ |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | Indiana University Southeast |
Annotation Status | Being Annotated (Expected completion by 10/26/2024) |
Plaque Notes | All plaques were pretty uniform and about 1 mm in diameter each time a plaque assay was performed. Most plaques were through the whole bacterial lawn as well without any cloudiness. Some had rough edges while some had very smooth and round edges. |
Has been Phamerated? | Yes |
Gene List |
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Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
139 |
Pitt Freezer Box Grid# |
F1 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |