| Detailed Information for Phage Oogie |
| Discovery Information |
| Isolation Host | Gordonia rubripertincta NRRL B-16540 |
| Found By | Mikayla Cline |
| Year Found | 2021 |
| Location Found | Georgetown, IN United States |
| Finding Institution | Indiana University-Southeast |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 25°C |
| GPS Coordinates | 38.293056 N, 85.966389 W Map |
| Discovery Notes | The soil was found in Georgetown, Indiana 47122. It was extracted from an old, abandoned strawberry patch next to the side of a house. The soil was very dry and hard to get up. It was also under a tarp and next to a concrete sidewalk. There were many weeds and other forms of greenery in the soil surrounding it. The collected sample had lots of roots and small sticks as well. |
| Naming Notes | Due to the upcoming holiday (Halloween), I chose a name from one of my favorite Halloween movies (The Nightmare Before Christmas). My favorite character is Oogie Boogie so I named the sample Oogie. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Apr 27, 2023 |
| Sequencing Facility | NC State Genomic Sciences Laboratory |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 2534 |
| Genome length (bp) | 90938 |
| Character of genome ends | Circularly Permuted |
| GC Content | 60.3% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | DQ |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Indiana University-Southeast |
| Annotation Status | Being Annotated (Expected completion by 10/26/2024) |
| Plaque Notes | All plaques were pretty uniform and about 1 mm in diameter each time a plaque assay was performed. Most plaques were through the whole bacterial lawn as well without any cloudiness. Some had rough edges while some had very smooth and round edges. |
| Has been Phamerated? | Yes |
| Gene List |
|
| Publication Info |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
139 |
| Pitt Freezer Box Grid# |
F1 |
| Available Files |
| Plaque Picture | Download |
| EM Picture | Download |
