Gordonia phage Hanem
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Detailed Information for Phage Hanem
Discovery Information
Isolation HostGordonia rubripertincta NRRL B-16540
Found BySophia Vining
Year Found2019
Location FoundFairfax, VA USA
Finding InstitutionGeorge Mason University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature22°C
GPS Coordinates38.831389 N, 77.358611 W Map
Discovery NotesThe sample was collected from a wet, organic/well fertilized, topsoil location. The sample was collected at 7:31 am.
Naming NotesI named my phage Hanem after my grandmother. Its an Arabic name that means Lady. My grandmother was always hard to impress, so the name was perfect for my phage.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJul 12, 2022
Sequencing FacilityNC State Genomic Sciences Laboratory
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage292
Genome length (bp)88511
Character of genome endsCircularly Permuted
GC Content60.3%
Sequencing NotesThere was one SNP in the population that was sequenced. At position 51653, about 40% of the reads had an A instead of the consensus G.
Fasta file available?Yes: Download fasta file
Characterization
ClusterDQ
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionGeorge Mason University
Annotation StatusIn GenBank
Plaque NotesVery small plaques
Has been Phamerated?Yes
Gene List

Click to View

Hanem_1
(DNA binding protein)

Hanem_2

Hanem_3

Hanem_4

Hanem_5

Hanem_6

Hanem_7
(DNA binding protein)

Hanem_8

Hanem_9

Hanem_10

Hanem_11

Hanem_12

Hanem_13

Hanem_14

Hanem_15

Hanem_16
(terminase)

Hanem_17

Hanem_18

Hanem_19

Hanem_20

Hanem_21

Hanem_22

Hanem_23
(portal protein)

Hanem_24

Hanem_25
(RNA ligase)

Hanem_26
(VIP2-like ADP-ribosyltransferase toxin)

Hanem_27

Hanem_28

Hanem_29
(minor tail protein)

Hanem_30
(minor tail protein)

Hanem_31
(lysin B)

Hanem_32
(minor tail protein)

Hanem_33

Hanem_34
(capsid maturation protease)

Hanem_35
(major capsid protein)

Hanem_36

Hanem_37

Hanem_38

Hanem_39

Hanem_40

Hanem_41
(head-to-tail adaptor)

Hanem_42

Hanem_43
(tail terminator)

Hanem_44

Hanem_45
(tail sheath protein)

Hanem_46
(tail tube protein)

Hanem_47
(tail assembly chaperone)

Hanem_48

Hanem_49
(tape measure protein)

Hanem_50
(LysM-like peptidoglycan binding protein)

Hanem_51
(minor tail protein)

Hanem_52
(minor tail protein)

Hanem_53
(minor tail protein)

Hanem_54

Hanem_55
(baseplate wedge protein)

Hanem_56
(baseplate J protein)

Hanem_57

Hanem_58

Hanem_59

Hanem_60
(lysin A)

Hanem_61

Hanem_62

Hanem_63

Hanem_64

Hanem_65
(DNA primase)

Hanem_66
(DnaB-like dsDNA helicase)

Hanem_67

Hanem_68

Hanem_69

Hanem_70

Hanem_71
(AAA ATPase domain protein)

Hanem_72
(AAA ATPase domain protein)

Hanem_73

Hanem_74

Hanem_75

Hanem_76

Hanem_77

Hanem_78

Hanem_79

Hanem_80

Hanem_81

Hanem_82

Hanem_83

Hanem_84

Hanem_85

Hanem_86
(helix-turn-helix DNA binding domain)

Hanem_87

Hanem_88
(ssDNA binding protein)

Hanem_89

Hanem_90
(lipoprotein)

Hanem_91

Hanem_92

Hanem_93

Hanem_94

Hanem_95

Hanem_96

Hanem_97
(DnaE-like DNA polymerase III (alpha))

Hanem_98

Hanem_99

Hanem_100

Hanem_101

Hanem_102

Hanem_103
(RecA-like DNA recombinase)

Hanem_104

Hanem_105

Hanem_106

Hanem_107

Hanem_108

Hanem_109

Hanem_110
(exonuclease)

Hanem_111

Hanem_112

Hanem_113

Hanem_114
(RuvC-like resolvase)

Hanem_115
(ParB-like nuclease domain)

Hanem_116

Hanem_117

Hanem_118

Hanem_119

Hanem_120

Hanem_121

Hanem_122

Hanem_123

Hanem_124

Hanem_125

Hanem_126

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOP867024
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 103
Pitt Freezer Box Grid# C4
Available Files
GenBank File for PhameratorDownload