The Actinobacteriophage Database

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Detailed Information for Phage Atuin
Discovery Information
Isolation Host	Arthrobacter globiformis B-2979
Found By	Lilianna Rolands
Year Found	2019
Location Found	River Falls, WI United States
Finding Institution	University of Wisconsin-River Falls
Program	Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?	Yes
Isolation Temperature	28°C
GPS Coordinates	44.853056 N, 92.627778 W Map
Discovery Notes	The soil was collected from a small forested area behind Stratton Hall on the UW-River Falls campus. It was cloudy, a little chilly, and had been raining.The soil was damp and packed.
Naming Notes	Named after the world-carrying space turtle in the Discworld books by Sir Terry Pratchett.
Sequencing Information
Sequencing Complete?	Yes
Date Sequencing Completed	Jan 27, 2020
Sequencing Facility	Pittsburgh Bacteriophage Institute
Shotgun Sequencing Method	Illumina Sequencing
Approximate Shotgun Coverage	575
Genome length (bp)	194200
Character of genome ends	Direct Terminal Repeat
Direct Terminal Repeat Length	17312 bp
End Determination Notes	At first, we thought Cluster FC phages had no defined ends and were circularly permuted, but as we sequenced more, it became clear that the genomes had a region of double coverage, which is characteristic of a direct terminal repeat. As with some other phages, the right end of the terminal repeat is well-defined, while the left end is less clear.
GC Content	54.2%
Fasta file available?	Yes: Download fasta file
Characterization
Cluster	FC
Subcluster	--
Cluster Life Cycle	Lytic
Other Cluster Members	Click to View Atuin Bloom DunneganBoMo Mimi Patbob Racecar SJReid Talia1610
Annotating Institution	University of Wisconsin-River Falls
Annotation Status	In GenBank
Plaque Notes	Plaques are small pinpoints, about 1mm in diameter, and are round, and clear. They have no halo and are uniform.
Morphotype	Siphoviridae
Has been Phamerated?	Yes
Gene List	Click to View Atuin_Draft_1 Atuin_Draft_2 Atuin_Draft_3 Atuin_Draft_4 Atuin_Draft_5 Atuin_Draft_6 Atuin_Draft_7 Atuin_Draft_8 Atuin_Draft_9 Atuin_Draft_10 Atuin_Draft_11 Atuin_Draft_12 Atuin_Draft_13 Atuin_Draft_14 Atuin_Draft_15 Atuin_Draft_16 Atuin_Draft_17 Atuin_Draft_18 Atuin_Draft_19 Atuin_Draft_20 Atuin_Draft_21 Atuin_Draft_22 Atuin_Draft_23 Atuin_Draft_24 Atuin_Draft_25 Atuin_Draft_26 Atuin_Draft_27 Atuin_Draft_28 Atuin_Draft_29 Atuin_Draft_30 Atuin_Draft_31 Atuin_Draft_32 Atuin_Draft_33 Atuin_Draft_34 Atuin_Draft_35 Atuin_Draft_36 Atuin_Draft_37 Atuin_Draft_38 Atuin_Draft_39 Atuin_Draft_40 Atuin_Draft_41 Atuin_Draft_42 Atuin_Draft_43 Atuin_Draft_44 Atuin_Draft_45 Atuin_Draft_46 Atuin_Draft_47 Atuin_Draft_48 Atuin_Draft_49 Atuin_Draft_50 Atuin_Draft_51 Atuin_Draft_52 Atuin_Draft_53 Atuin_Draft_54 Atuin_Draft_55 Atuin_Draft_56 Atuin_Draft_57 Atuin_Draft_58 Atuin_Draft_59 Atuin_Draft_60 Atuin_Draft_61 Atuin_Draft_62 Atuin_Draft_63 Atuin_Draft_64 Atuin_Draft_65 Atuin_Draft_66 Atuin_Draft_67 Atuin_Draft_68 Atuin_Draft_69 Atuin_Draft_70 Atuin_Draft_71 Atuin_Draft_72 Atuin_Draft_73 Atuin_Draft_74 Atuin_Draft_75 Atuin_Draft_76 Atuin_Draft_77 Atuin_Draft_78 Atuin_Draft_79 Atuin_Draft_80 Atuin_Draft_81 Atuin_Draft_82 Atuin_Draft_83 Atuin_Draft_84 Atuin_Draft_85 Atuin_Draft_86 Atuin_Draft_87 Atuin_Draft_88 Atuin_Draft_89 Atuin_Draft_90 Atuin_Draft_91 Atuin_Draft_92 Atuin_Draft_93 Atuin_Draft_94 Atuin_Draft_95 Atuin_Draft_96 Atuin_Draft_97 Atuin_Draft_98 Atuin_Draft_99 Atuin_Draft_100 Atuin_Draft_101 Atuin_Draft_102 Atuin_Draft_103 Atuin_Draft_104 Atuin_Draft_105 Atuin_Draft_106 Atuin_Draft_107 Atuin_Draft_108 Atuin_Draft_109 Atuin_Draft_110 Atuin_Draft_113 Atuin_Draft_115 Atuin_Draft_119 Atuin_Draft_122 Atuin_Draft_133 Atuin_Draft_139 Atuin_Draft_140 Atuin_Draft_141 Atuin_Draft_142 Atuin_Draft_143 Atuin_Draft_144 Atuin_Draft_145 Atuin_Draft_146 Atuin_Draft_150 Atuin_Draft_152 Atuin_Draft_153 Atuin_Draft_154 Atuin_Draft_155 Atuin_Draft_156 Atuin_Draft_158 Atuin_Draft_159 Atuin_Draft_160 Atuin_Draft_161 Atuin_Draft_162 Atuin_Draft_163 Atuin_Draft_166 Atuin_Draft_167 Atuin_Draft_168 Atuin_Draft_169 Atuin_Draft_170 Atuin_Draft_171 Atuin_Draft_172 Atuin_Draft_173 Atuin_Draft_174 Atuin_Draft_175 Atuin_Draft_176 Atuin_Draft_177 Atuin_Draft_178 Atuin_Draft_179 Atuin_Draft_180 Atuin_Draft_181 Atuin_Draft_182 Atuin_Draft_183 Atuin_Draft_184 Atuin_Draft_185 Atuin_Draft_186 Atuin_Draft_187 Atuin_Draft_188 Atuin_Draft_189 Atuin_Draft_190 Atuin_Draft_191 Atuin_Draft_192 Atuin_Draft_193 Atuin_Draft_194 Atuin_Draft_195 Atuin_Draft_196 Atuin_Draft_197 Atuin_Draft_198 Atuin_Draft_199 Atuin_Draft_200 Atuin_Draft_201 Atuin_Draft_202 Atuin_Draft_203 Atuin_Draft_204 Atuin_Draft_205 Atuin_Draft_206 Atuin_Draft_207 Atuin_Draft_208 Atuin_Draft_209 Atuin_Draft_210 Atuin_Draft_211 Atuin_Draft_212 Atuin_Draft_213 Atuin_Draft_214 Atuin_Draft_215 Atuin_Draft_216 Atuin_Draft_217 Atuin_Draft_218 Atuin_Draft_219 Atuin_Draft_220 Atuin_Draft_221 Atuin_Draft_222 Atuin_Draft_223 Atuin_Draft_224 Atuin_Draft_225 Atuin_Draft_226 Atuin_Draft_227 Atuin_Draft_228 Atuin_Draft_229 Atuin_Draft_230 Atuin_Draft_231 Atuin_Draft_232 Atuin_Draft_233 Atuin_Draft_234 Atuin_Draft_235 Atuin_Draft_236 Atuin_Draft_237 Atuin_Draft_238 Atuin_Draft_239 Atuin_Draft_240 Atuin_Draft_241 Atuin_Draft_242 Atuin_Draft_243 Atuin_Draft_244 Atuin_Draft_245 Atuin_Draft_246 Atuin_Draft_247 Atuin_Draft_248 Atuin_Draft_249 Atuin_Draft_250 Atuin_Draft_251 Atuin_Draft_252 Atuin_Draft_253 Atuin_Draft_254 Atuin_Draft_255 Atuin_Draft_256 Atuin_Draft_257 Atuin_Draft_258 Atuin_Draft_259 Atuin_Draft_260 Atuin_Draft_261 Atuin_Draft_262 Atuin_Draft_263 Atuin_Draft_264 Atuin_Draft_265 Atuin_Draft_266 Atuin_Draft_267 Atuin_Draft_268 Atuin_Draft_269 Atuin_Draft_270 Atuin_Draft_271 Atuin_Draft_272 Atuin_Draft_273 Atuin_Draft_274 Atuin_Draft_275 Atuin_Draft_276 Atuin_Draft_277 Atuin_Draft_278 Atuin_Draft_279 Atuin_Draft_280 Atuin_Draft_281 Atuin_Draft_282 Atuin_Draft_283 Atuin_Draft_284 Atuin_Draft_285 Atuin_Draft_286 Atuin_Draft_287 Atuin_Draft_288 Atuin_Draft_289 Atuin_Draft_290 Atuin_Draft_291 Atuin_Draft_292 Atuin_Draft_293 Atuin_Draft_294 Atuin_Draft_295 Atuin_Draft_296 Atuin_Draft_297 Atuin_Draft_298 Atuin_Draft_299 Atuin_Draft_300 Atuin_Draft_301 Atuin_Draft_302 Atuin_Draft_303 Atuin_Draft_304 Atuin_Draft_305 Atuin_Draft_306 Atuin_Draft_307 Atuin_Draft_308 Atuin_Draft_309 Atuin_Draft_310 Atuin_Draft_311 Atuin_Draft_312 Atuin_Draft_313 Atuin_Draft_314 Atuin_Draft_315 Atuin_Draft_316 Atuin_Draft_317 Atuin_Draft_318 Atuin_Draft_319 Atuin_Draft_320 Atuin_Draft_321 Atuin_Draft_322 Atuin_Draft_323 Atuin_Draft_324 Atuin_Draft_325 Atuin_Draft_326 Atuin_Draft_327 Atuin_Draft_328 Atuin_Draft_329 Atuin_Draft_330 Atuin_Draft_331 Atuin_Draft_332 Atuin_Draft_333 Atuin_Draft_334 Atuin_Draft_335 Atuin_Draft_336 Atuin_Draft_337 Atuin_Draft_338 Atuin_Draft_339 Atuin_Draft_340 Atuin_Draft_341 Atuin_Draft_342 Atuin_Draft_343 Atuin_Draft_344 Atuin_Draft_345 Atuin_Draft_346
Submitted Minimal DNA Master File	Download
Publication Info
Uploaded to GenBank?	Yes
GenBank Accession	OK040794
Refseq Number	None yet
Archiving Info
Archiving status	Archived
Pitt Freezer Box#	102
Pitt Freezer Box Grid#	E3
Available Files
Plaque Picture	Download
Restriction Digest Picture	Download
EM Picture	Download
GenBank File for Phamerator	Download

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