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Detailed Information for Phage SJReid
Discovery Information
Isolation Host	Arthrobacter globiformis B-2979
Found By	Hannah Kumar
Year Found	2023
Location Found	Montreal, Canada
Finding Institution	McGill University
Program	Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?	Unknown
Isolation Temperature	Not entered
GPS Coordinates	45.498889 N, 73.5825 W Map
Discovery Notes	This phage was discovered from a soil sample obtained on September 13, 2023 at 1:18 PM. The sample was found outside of an apartment building in a small front yard that had lots of weeds. It had rained earlier in the day, so the soil sample was slightly damp.
Naming Notes	I named this phage after my grandmother.
Sequencing Information
Sequencing Complete?	Yes
Date Sequencing Completed	Jan 2, 2024
Sequencing Facility	Pittsburgh Bacteriophage Institute
Shotgun Sequencing Method	Illumina Sequencing
Approximate Shotgun Coverage	391
Genome length (bp)	193007
Character of genome ends	Direct Terminal Repeat
Direct Terminal Repeat Length	20168 bp
End Determination Notes	At first, we thought Cluster FC phages had no defined ends and were circularly permuted, but as we sequenced more, it became clear that the genomes had a region of double coverage, which is characteristic of a direct terminal repeat. As with some other phages, the right end of the terminal repeat is well-defined, while the left end is less clear.
GC Content	53.6%
Fasta file available?	Yes: Download fasta file
Characterization
Cluster	FC
Subcluster	--
Cluster Life Cycle	Lytic
Other Cluster Members	Click to View Atuin Bloom DunneganBoMo Mimi Patbob Racecar SJReid Talia1610
Annotating Institution	McGill University
Annotation Status	Being Annotated (Expected completion by 6/30/2024)
Plaque Notes	Plaques were clear and small. Some of them had a hazy ring or "halo" around the outside of them.
Has been Phamerated?	Yes
Gene List	Click to View SJReid_Draft_1 SJReid_Draft_2 SJReid_Draft_3 SJReid_Draft_4 SJReid_Draft_5 SJReid_Draft_6 SJReid_Draft_7 SJReid_Draft_8 SJReid_Draft_9 SJReid_Draft_10 SJReid_Draft_11 SJReid_Draft_12 SJReid_Draft_13 SJReid_Draft_14 SJReid_Draft_15 SJReid_Draft_16 SJReid_Draft_17 SJReid_Draft_18 SJReid_Draft_19 SJReid_Draft_20 SJReid_Draft_21 SJReid_Draft_22 SJReid_Draft_23 SJReid_Draft_24 SJReid_Draft_25 SJReid_Draft_26 SJReid_Draft_27 SJReid_Draft_28 SJReid_Draft_29 SJReid_Draft_30 SJReid_Draft_31 SJReid_Draft_32 SJReid_Draft_33 SJReid_Draft_34 SJReid_Draft_35 SJReid_Draft_36 SJReid_Draft_37 SJReid_Draft_38 SJReid_Draft_39 SJReid_Draft_40 SJReid_Draft_41 SJReid_Draft_42 SJReid_Draft_43 SJReid_Draft_44 SJReid_Draft_45 SJReid_Draft_46 SJReid_Draft_47 SJReid_Draft_48 SJReid_Draft_49 SJReid_Draft_50 SJReid_Draft_51 SJReid_Draft_52 SJReid_Draft_53 SJReid_Draft_54 SJReid_Draft_55 SJReid_Draft_56 SJReid_Draft_57 SJReid_Draft_58 SJReid_Draft_59 SJReid_Draft_60 SJReid_Draft_61 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Publication Info
Uploaded to GenBank?	No
GenBank Accession	None yet
Refseq Number	None yet
Archiving Info
Archiving status	Archived
Pitt Freezer Box#	183
Pitt Freezer Box Grid#	H9

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