Arthrobacter phage Mimi
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Detailed Information for Phage Mimi
Discovery Information
Isolation HostArthrobacter globiformis B-2979
Found ByGabrielle Giglietti
Year Found2017
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates40.4406 N, 79.9959 W Map
Naming NotesI am naming this phage after my sister for her birthday. Happy birthday, Mimi!
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedSep 7, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage582
Genome length (bp)192528
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length19868 bp
End Determination NotesAt first, we thought Cluster FC phages had no defined ends and were circularly permuted, but as we sequenced more, it became clear that the genomes had a region of double coverage, which is characteristic of a direct terminal repeat. As with some other phages, the right end of the terminal repeat is well-defined, while the left end is less clear.
GC Content53.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterFC
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes296
Number of tRNAs33
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Mimi_1

Mimi_2

Mimi_3

Mimi_4

Mimi_5
(ParB-like nuclease domain)

Mimi_6

Mimi_7

Mimi_8

Mimi_9

Mimi_10

Mimi_11

Mimi_12

Mimi_13

Mimi_14

Mimi_15

Mimi_16

Mimi_17

Mimi_18

Mimi_19

Mimi_20

Mimi_21

Mimi_22

Mimi_23

Mimi_24

Mimi_25

Mimi_26

Mimi_27

Mimi_28

Mimi_29

Mimi_30

Mimi_31

Mimi_32

Mimi_33

Mimi_34

Mimi_35

Mimi_36

Mimi_37

Mimi_38

Mimi_39

Mimi_40

Mimi_41

Mimi_42

Mimi_43

Mimi_44

Mimi_45

Mimi_46

Mimi_47

Mimi_48

Mimi_49

Mimi_50

Mimi_51

Mimi_52

Mimi_53

Mimi_54

Mimi_55

Mimi_56

Mimi_57

Mimi_58

Mimi_59

Mimi_60

Mimi_61

Mimi_62

Mimi_63
(ADP-ribosyltransferase)

Mimi_64

Mimi_65

Mimi_66

Mimi_67

Mimi_68
(phosphoribosyl transferase)

Mimi_69

Mimi_70
(nicotinate ribosyltransferase)

Mimi_71

Mimi_72
(helix-turn-helix DNA binding domain)

Mimi_73

Mimi_74

Mimi_75

Mimi_76
(portal protein)

Mimi_77
(DNA helicase)

Mimi_78

Mimi_79

Mimi_80
(capsid maturation protease)

Mimi_81
(major capsid hexamer protein)

Mimi_82

Mimi_83

Mimi_84
(head-to-tail adaptor)

Mimi_85

Mimi_86

Mimi_87

Mimi_88
(tail assembly chaperone)

Mimi_89

Mimi_90
(tape measure protein)

Mimi_91
(minor tail protein)

Mimi_92
(minor tail protein)

Mimi_93
(minor tail protein)

Mimi_94
(minor tail protein)

Mimi_95

Mimi_96

Mimi_97

Mimi_98

Mimi_99
(DNA polymerase I)

Mimi_100
(RuvC-like resolvase)

Mimi_101
(DNA helicase)

Mimi_102
(ThyX-like thymidylate synthase)

Mimi_103
(Cas4-family exonuclease)

Mimi_104
(RecA-like DNA recombinase)

Mimi_105
(SSB protein)

Mimi_106
(MazG-like nucleotide pyrophosphohydrolase)

Mimi_107

Mimi_108
(NrdH-like glutaredoxin)

Mimi_109
(ribonucleotide reductase)

Mimi_110
(ribonucleotide reductase)

Mimi_111
(ribonucleotide reductase)

Mimi_112

Mimi_113

Mimi_114

Mimi_115 — tRNA
(tRNA-Trp(cca))

Mimi_116 — tRNA
(tRNA-Pro(tgg))

Mimi_117 — tRNA
(tRNA-Gly(tcc))

Mimi_118 — tRNA
(tRNA-Thr(tgt))

Mimi_119 — tRNA
(tRNA-Phe(gaa))

Mimi_120 — tRNA
(tRNA-Gln(ttg))

Mimi_121

Mimi_122 — tRNA
(tRNA-Gln(ctg))

Mimi_123 — tRNA
(tRNA-Ser(tga))

Mimi_124 — tRNA
(tRNA-Ile(gat))

Mimi_125

Mimi_126 — tRNA
(tRNA-Glu(ttc))

Mimi_127 — tRNA
(tRNA-Glu(ctc))

Mimi_128 — tRNA
(tRNA-Ser(tga))

Mimi_129 — tRNA
(tRNA-Ser(gga))

Mimi_130 — tRNA
(tRNA-Val(tac))

Mimi_131 — tRNA
(tRNA-Leu(caa))

Mimi_132 — tRNA
(tRNA-Ile(tat))

Mimi_133

Mimi_134 — tRNA
(tRNA-Arg(acg))

Mimi_135 — tRNA
(tRNA-Ser(gct))

Mimi_136 — tRNA
(tRNA-Leu(gag))

Mimi_137

Mimi_138 — tRNA
(tRNA-Leu(tag))

Mimi_139 — tRNA
(tRNA-Arg(tct))

Mimi_140 — tRNA
(tRNA-Tyr(gta))

Mimi_141 — tRNA
(tRNA-Lys(ctt))

Mimi_142 — tRNA
(tRNA-Lys(ttt))

Mimi_143

Mimi_144

Mimi_145

Mimi_146
(nuclease)

Mimi_147

Mimi_148
(endolysin)

Mimi_149
(endolysin, protease domain)

Mimi_150 — tRNA
(tRNA-Met(cat))

Mimi_151

Mimi_152

Mimi_153
(DnaE-like DNA polymerase III (alpha))

Mimi_154

Mimi_155 — tRNA
(tRNA-Met(cat))

Mimi_156 — tRNA
(tRNA-Asn(gtt))

Mimi_157 — tRNA
(tRNA-Ala(tgc))

Mimi_158

Mimi_159 — tRNA
(tRNA-Asp(gtc))

Mimi_160

Mimi_161
(RNA ligase)

Mimi_162 — tRNA
(tRNA-His(gtg))

Mimi_163
(UDP-glucose dehydrogenase)

Mimi_164

Mimi_165

Mimi_166 — tRNA
(tRNA-Arg(cct))

Mimi_167 — tRNA
(tRNA-Thr(ggt))

Mimi_168 — tRNA
(tRNA-Cys(gca))

Mimi_169
(HNH endonuclease)

Mimi_170
(MRE11 double-strand break endo/exonuclease)

Mimi_171

Mimi_172

Mimi_173
(glycosyltransferase)

Mimi_174

Mimi_175

Mimi_176
(glycosyltransferase)

Mimi_177
(glycosyltransferase)

Mimi_178
(nucleotidyl transferase)

Mimi_179

Mimi_180
(RNA ligase)

Mimi_181

Mimi_182
(polynucleotide kinase)

Mimi_183

Mimi_184
(tRNA nucleotidyltransferase)

Mimi_185
(RecA-like DNA recombinase)

Mimi_186

Mimi_187

Mimi_188
(minor tail protein)

Mimi_189

Mimi_190
(nucleotidyl transferase)

Mimi_191

Mimi_192
(WhiB family transcription factor)

Mimi_193
(DNA helicase)

Mimi_194
(DNA primase)

Mimi_195

Mimi_196

Mimi_197
(HNH endonuclease)

Mimi_198

Mimi_199
(DNA helicase)

Mimi_200

Mimi_201

Mimi_202

Mimi_203

Mimi_204

Mimi_205

Mimi_206

Mimi_207
(terminase)

Mimi_208

Mimi_209

Mimi_210

Mimi_211

Mimi_212

Mimi_213
(SprT-like protease)

Mimi_214

Mimi_215

Mimi_216

Mimi_217

Mimi_218

Mimi_219

Mimi_220

Mimi_221

Mimi_222

Mimi_223

Mimi_224

Mimi_225

Mimi_226

Mimi_227

Mimi_228

Mimi_229

Mimi_230

Mimi_231

Mimi_232

Mimi_233

Mimi_234

Mimi_235

Mimi_236

Mimi_237

Mimi_238

Mimi_239

Mimi_240

Mimi_241

Mimi_242

Mimi_243

Mimi_244

Mimi_245

Mimi_246

Mimi_247

Mimi_248

Mimi_249

Mimi_250

Mimi_251
(glycoside hydrolase)

Mimi_252

Mimi_253

Mimi_254

Mimi_255

Mimi_256

Mimi_257

Mimi_258

Mimi_259

Mimi_260

Mimi_261

Mimi_262

Mimi_263

Mimi_264

Mimi_265

Mimi_266

Mimi_267

Mimi_268

Mimi_269

Mimi_270

Mimi_271

Mimi_272

Mimi_273
(helix-turn-helix DNA binding domain)

Mimi_274

Mimi_275

Mimi_276

Mimi_277

Mimi_278

Mimi_279

Mimi_280

Mimi_281

Mimi_282

Mimi_283

Mimi_284

Mimi_285

Mimi_286

Mimi_287

Mimi_288

Mimi_289

Mimi_290
(ParB-like nuclease domain)

Mimi_291

Mimi_292

Mimi_293

Mimi_294

Mimi_295

Mimi_296

Mimi_297

Mimi_298

Mimi_299

Mimi_300

Mimi_301

Mimi_302

Mimi_303

Mimi_304

Mimi_305

Mimi_306

Mimi_307

Mimi_308

Mimi_309

Mimi_310

Mimi_311

Mimi_312

Mimi_313

Mimi_314

Mimi_315

Mimi_316

Mimi_317

Mimi_318

Mimi_319

Mimi_320

Mimi_321

Mimi_322

Mimi_323

Mimi_324

Mimi_325

Mimi_326

Mimi_327

Mimi_328

Mimi_329

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN234211
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 5
Pitt Freezer Box Grid# H1
Available Files
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload