Detailed Information for Phage AuntGwenStacy |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Kris, Christina, Kessler, Fatima, Mayra, Jonathon |
Year Found | 2024 |
Location Found | Maxwell, TX USA |
Finding Institution | Austin Community College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 37°C |
GPS Coordinates | 29.922176 N, 97.85208 W Map |
Discovery Notes | Found in chicken dust bath. Unable to put full names - Jonathon Nuzum, Kristen Smith, Christina Martinez, Kessler Pontin, Fatima Villagrana, Mayra Vazquez Martinez Directed by Kissaou Tchedre |
Naming Notes | The name came from 3 chickens named Aunt May, Gwen, and Stacy where the sample came from. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jul 16, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 3380 |
Genome length (bp) | 75686 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 12 bases |
Overhang Sequence | TGCCGCCCGGTA |
GC Content | 66.0% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | Y |
Subcluster | -- |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Austin Community College |
Annotation Status | Being Annotated (Expected completion by 1/16/2025) |
Plaque Notes | Cloudy circular plaque 1/4 inch in diameter |
Morphotype | Siphoviridae |
Number of Genes | 130 |
Number of tRNAs | 2 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
188 |
Pitt Freezer Box Grid# |
G10 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |