Rhodococcus phage Belenaria
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Detailed Information for Phage Belenaria
Discovery Information
Isolation HostRhodococcus erythropolis RIA 643
Found ByBelen Rodriguez
Year Found2014
Location FoundBoston, MA USA
Finding InstitutionFlorida Gulf Coast University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates42.347015 N, 71.134265 W Map
Discovery NotesThe sample was collected by a Florida Gulf Coast University alumni, Michaela Smith, in Boston, Massachusetts. The student collected several soil samples from Boston and sent them to Florida Gulf Coast University.
Naming NotesThe name "Belenaria" is derived from the discoverer's name. I added "aria" at the end so it could sound more like an actual virus.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 16, 2015
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage3275
Genome length (bp)46538
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGCCGTGAT
End Determination NotesBuildups of reads from Illumina sequencing.
GC Content58.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCA
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionAlliance University (formerly Nyack College)
Annotation StatusIn GenBank
Plaque NotesThe Boston sample produces very lytic plaques. The average diameter is approximately a little bit less than one millimeter long. The titer for the medium titer lysate is 6.14 x 10^5 pfu/mL.
MorphotypeSiphoviridae
Number of Genes68
Number of tRNAs3
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

Belenaria_1

Belenaria_2

Belenaria_3
(terminase small subunit)

Belenaria_4 — tRNA
(codon recognized: AAC)

Belenaria_5 — tRNA

Belenaria_6 — tRNA
(codon recognized: UGG)

Belenaria_7
(endolysin)

Belenaria_8
(terminase large subunit)

Belenaria_9
(portal protein)

Belenaria_10
(capsid maturation protease)

Belenaria_11
(scaffolding protein)

Belenaria_12
(major capsid protein)

Belenaria_13

Belenaria_14
(head-to-tail adaptor)

Belenaria_15
(head-to-tail stopper)

Belenaria_16

Belenaria_17
(tail terminator)

Belenaria_18
(major tail protein)

Belenaria_19
(tail assembly chaperone)

Belenaria_20
(tail assembly chaperone)

Belenaria_21
(tape measure protein)

Belenaria_22
(minor tail protein)

Belenaria_23
(minor tail protein)

Belenaria_24
(minor tail protein)

Belenaria_25
(holin)

Belenaria_26

Belenaria_27
(minor tail protein)

Belenaria_28

Belenaria_29
(serine integrase)

Belenaria_30

Belenaria_31

Belenaria_32
(deoxycytidylate deaminase)

Belenaria_33

Belenaria_34

Belenaria_35

Belenaria_36
(DNA polymerase I)

Belenaria_37
(helix-turn-helix DNA-binding domain protein)

Belenaria_38
(ThyX-like thymidylate synthase)

Belenaria_39

Belenaria_40

Belenaria_41
(ribonucleotide reductase)

Belenaria_42

Belenaria_43
(DNA binding protein)

Belenaria_44
(metallophosphoesterase)

Belenaria_45

Belenaria_46
(glutaredoxin)

Belenaria_47

Belenaria_48
(DNA primase)

Belenaria_49
(DNA primase)

Belenaria_50

Belenaria_51
(endonuclease VII)

Belenaria_52

Belenaria_53
(DnaB-like dsDNA helicase)

Belenaria_54

Belenaria_55

Belenaria_56

Belenaria_57
(Cas4 exonuclease)

Belenaria_58

Belenaria_59
(immunity repressor)

Belenaria_60

Belenaria_61

Belenaria_62

Belenaria_63

Belenaria_64

Belenaria_65
(ArdA-like antirestriction protein)

Belenaria_66

Belenaria_67

Belenaria_68

Belenaria_69

Belenaria_70

Belenaria_71

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK524495
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 124
Pitt Freezer Box Grid# C1
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload