Arthrobacter phage BenchScraper
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Detailed Information for Phage BenchScraper
Discovery Information
Isolation HostArthrobacter globiformis B-2979
Found ByNicolas Chaney-Martinez
Year Found2023
Location FoundMandeville, LA United States of America
Finding InstitutionSoutheastern Louisiana University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates30.388706 N, 90.057371 W Map
Discovery NotesFound in soil 10 cm beneath grass near a creek.
Naming NotesI enjoy baking and a bench scraper is one of the tools you use.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 16, 2024
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage1151
Genome length (bp)51219
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCCGGTGA
GC Content62.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterAY
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionSoutheastern Louisiana University
Annotation StatusIn GenBank
Plaque NotesSmall, round, clear plaques about 1.25 mm in diameter.
MorphotypeSiphoviridae
Number of Genes96
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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BenchScraper_1
(terminase small subunit)

BenchScraper_2
(terminase large subunit)

BenchScraper_3
(terminase large subunit)

BenchScraper_4
(portal protein)

BenchScraper_5
(capsid maturation protease)

BenchScraper_6
(scaffolding protein)

BenchScraper_7
(LamD-like capsid decoration protein)

BenchScraper_8
(major capsid protein)

BenchScraper_9

BenchScraper_10
(head-to-tail adaptor)

BenchScraper_11
(head-to-tail stopper)

BenchScraper_12

BenchScraper_13
(tail terminator)

BenchScraper_14

BenchScraper_15
(major tail protein)

BenchScraper_16
(tail assembly chaperone)

BenchScraper_17
(tail assembly chaperone)

BenchScraper_18

BenchScraper_19
(tape measure protein)

BenchScraper_20
(minor tail protein)

BenchScraper_21
(minor tail protein)

BenchScraper_22
(minor tail protein)

BenchScraper_23
(minor tail protein)

BenchScraper_24

BenchScraper_25

BenchScraper_26

BenchScraper_27
(endolysin)

BenchScraper_28

BenchScraper_29

BenchScraper_30

BenchScraper_31

BenchScraper_32
(esterase)

BenchScraper_33

BenchScraper_34
(esterase)

BenchScraper_35

BenchScraper_36
(tyrosine integrase)

BenchScraper_37

BenchScraper_38
(helix-turn-helix DNA binding domain protein)

BenchScraper_39
(tyrosine integrase)

BenchScraper_40

BenchScraper_41

BenchScraper_42

BenchScraper_43

BenchScraper_44

BenchScraper_45

BenchScraper_46

BenchScraper_47

BenchScraper_48

BenchScraper_49
(IrrE-like protein)

BenchScraper_50
(helix-turn-helix DNA binding domain protein)

BenchScraper_51
(helix-turn-helix DNA binding domain protein)

BenchScraper_52
(HNH endonuclease)

BenchScraper_53
(helix-turn-helix DNA binding domain protein)

BenchScraper_54

BenchScraper_55
(helix-turn-helix DNA binding domain protein)

BenchScraper_56

BenchScraper_57

BenchScraper_58

BenchScraper_59

BenchScraper_60

BenchScraper_61

BenchScraper_62

BenchScraper_63

BenchScraper_64

BenchScraper_65

BenchScraper_66

BenchScraper_67

BenchScraper_68
(exonuclease)

BenchScraper_69

BenchScraper_70

BenchScraper_71
(HNH endonuclease)

BenchScraper_72
(SSB protein)

BenchScraper_73
(glutaredoxin)

BenchScraper_74

BenchScraper_75
(DNA helicase/methylase)

BenchScraper_76
(helix-turn-helix DNA binding domain protein)

BenchScraper_77
(DNA polymerase III sliding clamp beta)

BenchScraper_78

BenchScraper_79
(DNA methyltransferase)

BenchScraper_80

BenchScraper_81

BenchScraper_82

BenchScraper_83

BenchScraper_84
(MazG-like nucleotide pyrophosphohydrolase)

BenchScraper_85

BenchScraper_86
(RusA-like resolvase)

BenchScraper_87

BenchScraper_88

BenchScraper_89

BenchScraper_90

BenchScraper_91
(helix-turn-helix DNA binding domain protein)

BenchScraper_92

BenchScraper_93
(HNH endonuclease)

BenchScraper_94

BenchScraper_95

BenchScraper_96
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPQ362661
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 8.4 X 10^9 PFU/mL
Pitt Freezer Box# 184
Pitt Freezer Box Grid# B8
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload