Gordonia phage BiteSize
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Detailed Information for Phage BiteSize
Discovery Information
Isolation HostGordonia terrae 3612
Former namesAliquot
Found ByShivangi Patel
Year Found2019
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.44 N, 79.95 W Map
Discovery NotesSoil was heavy and taken from the top (superficial). The sprinklers had been on so the soil was damp. Small green plants were growing nearby (within a couple inches). Larger plants were growing 1 to 2 feet away from collection site. It was a sunny day with cloudless skies.
Naming NotesThis phage is named for its tiny plaque size- almost as if they are bitesized!
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 5, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage821
Genome length (bp)66696
Character of genome endsCircularly Permuted
GC Content59.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDG
SubclusterDG1
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque NotesVery small, somewhat needle tip sized/pin drop shaped.
Number of Genes96
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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BiteSize_1
(terminase)

BiteSize_2
(portal protein)

BiteSize_3

BiteSize_4

BiteSize_5

BiteSize_6

BiteSize_7

BiteSize_8
(metalloprotease)

BiteSize_9
(scaffolding protein)

BiteSize_10
(minor capsid protein)

BiteSize_11
(major capsid protein)

BiteSize_12

BiteSize_13
(head-to-tail adaptor)

BiteSize_14

BiteSize_15
(minor capsid protein)

BiteSize_16
(tail terminator)

BiteSize_17

BiteSize_18

BiteSize_19
(major tail protein)

BiteSize_20
(tail assembly chaperone)

BiteSize_21
(tail assembly chaperone)

BiteSize_22
(tape measure protein)

BiteSize_23
(minor tail protein)

BiteSize_24
(minor tail protein)

BiteSize_25
(minor tail protein)

BiteSize_26

BiteSize_27
(minor tail protein)

BiteSize_28

BiteSize_29
(lysin A)

BiteSize_30
(holin)

BiteSize_31

BiteSize_32

BiteSize_33

BiteSize_34

BiteSize_35

BiteSize_36

BiteSize_37

BiteSize_38

BiteSize_39

BiteSize_40

BiteSize_41

BiteSize_42

BiteSize_43

BiteSize_44

BiteSize_45

BiteSize_46

BiteSize_47

BiteSize_48

BiteSize_49

BiteSize_50
(DNA helicase)

BiteSize_51
(HNH endonuclease)

BiteSize_52

BiteSize_53

BiteSize_54
(Cas4 family exonuclease)

BiteSize_55

BiteSize_56
(AAA-ATPase)

BiteSize_57

BiteSize_58

BiteSize_59
(oxidoreductase)

BiteSize_60
(methyltransferase)

BiteSize_61

BiteSize_62

BiteSize_63

BiteSize_64
(DnaE-like DNA polymerase III)

BiteSize_65

BiteSize_66
(DnaE-like DNA polymerase III)

BiteSize_67

BiteSize_68

BiteSize_69

BiteSize_70

BiteSize_71

BiteSize_72
(ThyX-like thymidylate synthase)

BiteSize_73

BiteSize_74
(DNA binding protein)

BiteSize_75

BiteSize_76

BiteSize_77

BiteSize_78

BiteSize_79

BiteSize_80
(RuvC-like resolvase)

BiteSize_81

BiteSize_82
(ribbon-helix-helix DNA binding domain protein)

BiteSize_83
(DNA primase)

BiteSize_84

BiteSize_85

BiteSize_86

BiteSize_87

BiteSize_88

BiteSize_89

BiteSize_90

BiteSize_91

BiteSize_92

BiteSize_93

BiteSize_94

BiteSize_95
(lysin B)

BiteSize_96

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMT771348
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 113
Pitt Freezer Box Grid# G7
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload