Detailed Information for Phage BiteSize |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Former names | Aliquot |
Found By | Shivangi Patel |
Year Found | 2019 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 30°C |
GPS Coordinates | 40.44 N, 79.95 W Map |
Discovery Notes | Soil was heavy and taken from the top (superficial). The sprinklers had been on so the soil was damp. Small green plants were growing nearby (within a couple inches). Larger plants were growing 1 to 2 feet away from collection site. It was a sunny day with cloudless skies. |
Naming Notes | This phage is named for its tiny plaque size- almost as if they are bitesized! |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 5, 2020 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 821 |
Genome length (bp) | 66696 |
Character of genome ends | Circularly Permuted |
GC Content | 59.5% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | DG |
Subcluster | DG1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Plaque Notes | Very small, somewhat needle tip sized/pin drop shaped. |
Number of Genes | 96 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MT771348 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
113 |
Pitt Freezer Box Grid# |
G7 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |