Gordonia phage LilyPad
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Detailed Information for Phage LilyPad
Discovery Information
Isolation HostGordonia rubripertincta NRRL B-16540
Found ByCasia Esparza
Year Found2021
Location FoundSocorro, NM USA
Finding InstitutionNew Mexico Institute of Mining and Technology
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature31°C
GPS Coordinates34.06 N, 106.91 W Map
Discovery NotesThe soil was taken from a small pond bank near a golf course.
Naming NotesThe phage was isolated from pond bank soil near lily pads
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 25, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1160
Genome length (bp)64158
Character of genome endsCircularly Permuted
GC Content59.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDG
SubclusterDG1
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionNew Mexico Institute of Mining and Technology
Annotation StatusAwaiting_QC
Plaque NotesThe plaques are small and pin-prick-like. They are clear, allowing for light to shine through when held up to a light.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List
Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 136
Pitt Freezer Box Grid# F5
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload