Arthrobacter phage BlueShadow
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Detailed Information for Phage BlueShadow
Discovery Information
Isolation HostArthrobacter globiformis B-2979
Found ByCelia Brekken
Year Found2023
Location FoundBismarck, ND United States
Finding InstitutionUniversity of Mary
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates46.72623 N, 100.75309 W Map
Discovery NotesThe weather was slightly cloudy and quite breezy outside. The sample was found next to a stone retaining wall on the University of Mary campus. The soil was dark brown and somewhat moist.
Naming NotesThe name BlueShadow comes from an episode of Star Wars the Clone Wars where there was a virus in the water on the planet Naboo.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 3, 2025
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Sequencer UsedIllumina NextSeq 1000
Read TypeSingle-end reads
Read Length100 bp
Approximate Shotgun Coverage4931
Genome length (bp)52454
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCCGGTGA
GC Content62.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterAY
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Mary
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes91
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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BlueShadow_1
(terminase, small subunit)

BlueShadow_2
(terminase, large subunit (ATPase domain))

BlueShadow_3
(terminase, large subunit (nuclease domain))

BlueShadow_4
(portal protein)

BlueShadow_5
(capsid maturation protease)

BlueShadow_6
(scaffolding protein)

BlueShadow_7
(capsid decoration protein)

BlueShadow_8
(major capsid protein)

BlueShadow_9

BlueShadow_10
(head-to-tail adaptor)

BlueShadow_11
(head-to-tail stopper)

BlueShadow_12

BlueShadow_13
(tail terminator)

BlueShadow_14

BlueShadow_15
(major tail protein)

BlueShadow_16
(tail assembly chaperone)

BlueShadow_17
(tail assembly chaperone)

BlueShadow_18

BlueShadow_19
(tape measure protein)

BlueShadow_20
(minor tail protein)

BlueShadow_21
(minor tail protein)

BlueShadow_22
(minor tail protein)

BlueShadow_23
(minor tail protein)

BlueShadow_24

BlueShadow_25

BlueShadow_26

BlueShadow_27
(endolysin)

BlueShadow_28

BlueShadow_29

BlueShadow_30
(tail collar fiber)

BlueShadow_31

BlueShadow_32
(minor tail protein)

BlueShadow_33

BlueShadow_34
(esterase)

BlueShadow_35

BlueShadow_36
(tyrosine integrase)

BlueShadow_37

BlueShadow_38
(HNH endonuclease)

BlueShadow_39
(tyrosine integrase)

BlueShadow_40

BlueShadow_41

BlueShadow_42
(HNH endonuclease)

BlueShadow_43

BlueShadow_45

BlueShadow_46

BlueShadow_47

BlueShadow_48

BlueShadow_49
(histidine triad nucleotide binding protein)

BlueShadow_50
(IrrE-like protein)

BlueShadow_51
(helix-turn-helix DNA binding domain)

BlueShadow_52
(helix-turn-helix DNA binding domain)

BlueShadow_53
(HNH endonuclease)

BlueShadow_54
(helix-turn-helix DNA binding domain)

BlueShadow_55

BlueShadow_56
(DNA binding protein)

BlueShadow_57

BlueShadow_58

BlueShadow_59

BlueShadow_60

BlueShadow_61

BlueShadow_62

BlueShadow_63

BlueShadow_64
(helix-turn-helix DNA binding domain)

BlueShadow_65

BlueShadow_66

BlueShadow_67
(exonuclease)

BlueShadow_68

BlueShadow_69
(ASCE ATPase)

BlueShadow_70
(SSB protein)

BlueShadow_71

BlueShadow_72
(thioredoxin)

BlueShadow_73
(DNA helicase/methylase)

BlueShadow_74
(helix-turn-helix DNA binding domain)

BlueShadow_75
(DNA polymerase III sliding clamp (Beta))

BlueShadow_76

BlueShadow_77
(DNA methyltransferase)

BlueShadow_78
(DNA binding protein)

BlueShadow_79

BlueShadow_80
(HNH endonuclease)

BlueShadow_81

BlueShadow_82
(MazG-like nucleotide pyrophosphohydrolase)

BlueShadow_83

BlueShadow_84
(RusA-like resolvase)

BlueShadow_85

BlueShadow_86

BlueShadow_87

BlueShadow_88

BlueShadow_89
(helix-turn-helix DNA binding domain)

BlueShadow_90

BlueShadow_91

BlueShadow_92
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPV876918
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 197
Pitt Freezer Box Grid# G3
Available Files
EM PictureDownload
GenBank File for PhameratorDownload