Arthrobacter phage ChuckDuck
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Detailed Information for Phage ChuckDuck
Discovery Information
Isolation HostArthrobacter globiformis B-2979
Found ByCorwin Trouteaud and Colleen Guzik
Year Found2023
Location FoundOwings Mills, MD United States
Finding InstitutionStevenson University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates39.424413 N, 76.77817 W Map
Discovery NotesSouthwest corner of the Stevenson University parking lot at Wooded Way, 1 foot by one foot from the corner of the road.
Naming NotesA tongue twister about a duck named Chuck that we thought was funny.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 20, 2024
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage1457
Genome length (bp)42833
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCCGGAGA
GC Content65.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterFA
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionStevenson University
Annotation StatusIn GenBank
Plaque NotesPlaques are uniform, same spherical shape, no turbidity, clear border, and small in size.
Number of Genes68
Number of tRNAs1
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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ChuckDuck_1
(terminase small subunit)

ChuckDuck_2
(terminase large subunit)

ChuckDuck_3
(portal protein)

ChuckDuck_4

ChuckDuck_5
(scaffolding protein)

ChuckDuck_6
(major capsid protein)

ChuckDuck_7
(capsid decoration protein)

ChuckDuck_8

ChuckDuck_9
(head-to-tail adaptor)

ChuckDuck_10
(head-to-tail stopper)

ChuckDuck_11

ChuckDuck_12
(tail terminator)

ChuckDuck_13

ChuckDuck_14
(major tail protein)

ChuckDuck_15
(tail assembly chaperone)

ChuckDuck_16
(tail assembly chaperone)

ChuckDuck_17

ChuckDuck_18
(tape measure protein)

ChuckDuck_19
(minor tail protein)

ChuckDuck_20
(minor tail protein)

ChuckDuck_21
(minor tail protein)

ChuckDuck_22

ChuckDuck_23

ChuckDuck_24

ChuckDuck_25

ChuckDuck_26
(endolysin)

ChuckDuck_27

ChuckDuck_28

ChuckDuck_29

ChuckDuck_30

ChuckDuck_31
(esterase)

ChuckDuck_32

ChuckDuck_33
(esterase)

ChuckDuck_34

ChuckDuck_35
(tyrosine integrase)

ChuckDuck_36

ChuckDuck_37

ChuckDuck_38

ChuckDuck_39
(tyrosine integrase)

ChuckDuck_40
(helix-turn-helix DNA binding domain protein)

ChuckDuck_41
(immunity repressor)

ChuckDuck_42
(helix-turn-helix DNA binding domain protein)

ChuckDuck_43
(helix-turn-helix DNA binding domain protein)

ChuckDuck_44

ChuckDuck_45

ChuckDuck_46

ChuckDuck_47

ChuckDuck_48
(Cas4 exonuclease)

ChuckDuck_49

ChuckDuck_50

ChuckDuck_51

ChuckDuck_52

ChuckDuck_53
(helix-turn-helix DNA binding domain protein)

ChuckDuck_54

ChuckDuck_55

ChuckDuck_56

ChuckDuck_57

ChuckDuck_58

ChuckDuck_59
(DNA primase/helicase)

ChuckDuck_60

ChuckDuck_61

ChuckDuck_62

ChuckDuck_63
(Holliday junction resolvase)

ChuckDuck_64

ChuckDuck_65

ChuckDuck_66

ChuckDuck_67 — tRNA
(tRNA-Gly(ccc))

ChuckDuck_68

ChuckDuck_69
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPQ362676
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 183
Pitt Freezer Box Grid# F4
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload