Arthrobacter phage CookieBear
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Detailed Information for Phage CookieBear | |
Discovery Information | |
Isolation Host | Arthrobacter globiformis B-2979 |
Found By | Kanza Hussain |
Year Found | 2023 |
Location Found | Lombard, IL United States |
Finding Institution | Benedictine University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 22°C |
GPS Coordinates | 41.852909 N, 88.022013 W Map |
Discovery Notes | The soil was moisture than usual because of a rainy forecast that day. Temperature was in the mid 70's. Soil was dark, moist, but not muddy, and had a clay-like structure. Rocks, leaves, and wood-like pieces were surrounding the area. |
Naming Notes | I chose the name CookieBear, because it is the name of my car and is special to me. |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Mar 19, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Sequencer Used | Illumina MiSeq |
Read Type | Single-end reads |
Read Length | 150 bp |
Approximate Shotgun Coverage | 1349 |
Genome length (bp) | 52202 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CGCCGGTGA |
GC Content | 62.8% |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | AY |
Subcluster | -- |
Cluster Life Cycle | Temperate |
Other Cluster Members | |
Annotating Institution | Benedictine University |
Annotation Status | Overdue (Expected completion by 2/28/2025) |
Plaque Notes | Plaque diameter = 2.5 mm Clear Lytic Phage CookieBear is a Siphoviridae, a double stranded DNA virus, because it has a single head and a tail. |
Morphotype | Siphoviridae |
Number of Genes | 93 |
Number of tRNAs | 1 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List | |
Publication Info | |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Not in Pitt Archives |
Available Files | |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |