Detailed Information for Phage CookieDog | |
Discovery Information | |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Matias Rengifo Keller |
Year Found | 2024 |
Location Found | Homestead, FL United States |
Finding Institution | Florida International University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 25.39746 N, 80.57309 W Map |
Discovery Notes | Collected in a marsh on the outskirts, but not within Everglades National Park. The sample was collected under a shaded grove where the soil was saturated with water. |
Naming Notes | This name was chosen after a nickname given to one of the guitarists of a band called King Gizzard and the Lizard Wizard. |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Dec 26, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 10325 |
Genome length (bp) | 38761 |
Character of genome ends | Circularly Permuted |
GC Content | 68.0% |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | GA |
Subcluster | -- |
Cluster Life Cycle | Unknown |
Other Cluster Members | |
Annotating Institution | Florida International University |
Annotation Status | Being Annotated (Expected completion by 5/1/2025) |
Plaque Notes | Smooth circular margin with a clear turbidity morphology. The size morphology of the plaques was ~2-3mm. |
Morphotype | Siphoviridae |
Number of Genes | 65 |
Number of tRNAs | 1 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
Click to ViewCookieDog_1 CookieDog_2 CookieDog_3 CookieDog_4 CookieDog_5 CookieDog_6 CookieDog_7 CookieDog_8 CookieDog_9 CookieDog_10 CookieDog_11 CookieDog_12 CookieDog_13 CookieDog_14 CookieDog_15 CookieDog_16 CookieDog_17 CookieDog_18 CookieDog_19 CookieDog_20 CookieDog_21 CookieDog_22 CookieDog_23 CookieDog_24 CookieDog_25 CookieDog_26 CookieDog_27 CookieDog_28 CookieDog_29 CookieDog_30 CookieDog_31 CookieDog_32 CookieDog_33 CookieDog_34 CookieDog_35 CookieDog_36 CookieDog_37 CookieDog_38 CookieDog_39 CookieDog_40 CookieDog_41 CookieDog_42 CookieDog_43 CookieDog_44 CookieDog_45 CookieDog_46 CookieDog_47 CookieDog_48 — tRNA CookieDog_49 CookieDog_50 CookieDog_51 CookieDog_52 CookieDog_53 CookieDog_54 CookieDog_55 CookieDog_56 CookieDog_57 CookieDog_58 CookieDog_59 CookieDog_60 CookieDog_61 CookieDog_62 CookieDog_63 CookieDog_64 CookieDog_65 CookieDog_66 |
Publication Info | |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Not in Pitt Archives |