| Detailed Information for Phage Coriander | |
| Discovery Information | |
| Isolation Host | Gordonia terrae 3612 |
| Found By | N. Anderson, H. Hamada, A. Ponna, J. Wood |
| Year Found | 2022 |
| Location Found | Pittsburgh, PA United States |
| Finding Institution | University of Pittsburgh |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 30°C |
| GPS Coordinates | 40.43704 N, 79.96309 W Map |
| Discovery Notes | Our soil sample was collected from a flower bed on the corner of Forbes and Craft ave. Was collected the morning of experiment and isolation-very fresh. |
| Naming Notes | Our phage name was inspired by the one of the flowers that laid beside it on the flower bed, which slightly resembled a coriander plant. The name is also symbolic of the freshness behind the soil sample collected for the experiment. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 24, 2024 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 1901 |
| Genome length (bp) | 44192 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | TCCCGCGGTA |
| GC Content | 66.8% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | DB |
| Subcluster | -- |
| Cluster Life Cycle | Temperate |
| Other Cluster Members | |
| Annotating Institution | University of Pittsburgh |
| Annotation Status | Being Annotated (Expected completion by 12/31/2024) |
| Number of Genes | 66 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewCoriander_1 Coriander_2 Coriander_3 Coriander_4 Coriander_5 Coriander_6 Coriander_7 Coriander_8 Coriander_9 Coriander_10 Coriander_11 Coriander_12 Coriander_13 Coriander_14 Coriander_15 Coriander_16 Coriander_17 Coriander_18 Coriander_19 Coriander_20 Coriander_21 Coriander_22 Coriander_23 Coriander_24 Coriander_25 Coriander_26 Coriander_27 Coriander_28 Coriander_29 Coriander_30 Coriander_31 Coriander_32 Coriander_33 Coriander_34 Coriander_35 Coriander_36 Coriander_37 Coriander_38 Coriander_39 Coriander_40 Coriander_41 Coriander_42 Coriander_43 Coriander_44 Coriander_45 Coriander_46 Coriander_47 Coriander_48 Coriander_49 Coriander_50 Coriander_51 Coriander_52 Coriander_53 Coriander_54 Coriander_55 Coriander_56 Coriander_57 Coriander_58 Coriander_59 Coriander_60 Coriander_61 Coriander_62 Coriander_63 Coriander_64 Coriander_65 Coriander_66 |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 159 |
| Pitt Freezer Box Grid# | E9 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
